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Move environment variable documentation into .env.sample

Duggan, John requested to merge 13-move-environment-variable-documentation-into-env-sample into dev

Summary of Changes

Removes the incomplete documentation on environment variables from the readme and puts more complete documentation into .env.sample.

Checklist

  • The MR has a clear and concise title
  • Code is self-documented and follows style guidelines.
  • Automated tests are written and pass successfully.
  • Regression tests (e.g. manually triggered system tests, manual GUI/tool tests, ...) are performed to make sure the MR does not break anything (when applicable)
  • Readme file is present and up-to-date.

Documentation Updates

Additional Notes

Closes #13 (closed)

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