Loading .gitlab-ci.yml +0 −24 Original line number Diff line number Diff line Loading @@ -34,27 +34,3 @@ service-build: tags: - rse-multi-builder testing: stage: test script: - echo "Running tests for all tools." - cd `pwd`/tools/neutrons - TEST_FOLDERS=`find . -type f -name "*.xml" -exec grep -l "<test>" {} + | awk -F/ 'BEGIN { OFS="/"; } { $NF=""; sub(/\/$/, ""); print }' | sort -u | sed 's/^\.\///'` - echo testing in $TEST_FOLDERS - | for FOLDER in $TEST_FOLDERS do docker run -v `pwd`:`pwd` --workdir `pwd`/$FOLDER code.ornl.gov:4567/ndip/galaxy-tools planemo test --galaxy_root /galaxy --docker --no_conda_auto_init --test_output_junit `pwd`/junit_output_${FOLDER}.xml --galaxy_url https://calvera-test.ornl.gov --galaxy_user_key $CALVERA_TEST_API_KEY --galaxy_admin_key $CALVERA_TEST_ADMIN_KEY done artifacts: when: always reports: junit: tools/neutrons/junit_output*.xml tags: - rse-multi-builder rules: - if: '$CI_COMMIT_BRANCH == "dev"' when: always - if: '$CI_COMMIT_BRANCH == "main"' when: manual - when: never Loading
.gitlab-ci.yml +0 −24 Original line number Diff line number Diff line Loading @@ -34,27 +34,3 @@ service-build: tags: - rse-multi-builder testing: stage: test script: - echo "Running tests for all tools." - cd `pwd`/tools/neutrons - TEST_FOLDERS=`find . -type f -name "*.xml" -exec grep -l "<test>" {} + | awk -F/ 'BEGIN { OFS="/"; } { $NF=""; sub(/\/$/, ""); print }' | sort -u | sed 's/^\.\///'` - echo testing in $TEST_FOLDERS - | for FOLDER in $TEST_FOLDERS do docker run -v `pwd`:`pwd` --workdir `pwd`/$FOLDER code.ornl.gov:4567/ndip/galaxy-tools planemo test --galaxy_root /galaxy --docker --no_conda_auto_init --test_output_junit `pwd`/junit_output_${FOLDER}.xml --galaxy_url https://calvera-test.ornl.gov --galaxy_user_key $CALVERA_TEST_API_KEY --galaxy_admin_key $CALVERA_TEST_ADMIN_KEY done artifacts: when: always reports: junit: tools/neutrons/junit_output*.xml tags: - rse-multi-builder rules: - if: '$CI_COMMIT_BRANCH == "dev"' when: always - if: '$CI_COMMIT_BRANCH == "main"' when: manual - when: never