migrate to python 3.8 and tomopy 1.10
Created by: yxqd
This branch is intended to restore the tests for imars3d. It was tested on my ubuntu box and the following two test scripts passed running from the root dir of the repo:
py.test
python tests/workflows/recon/test_CT_travisCI.py
The test data needed were copied from /SNS/users/lj7/dv/imaging/iMars3D/tests/iMars3D_data_set
Here is the installation instruction:
conda config --add channels conda-forge
conda create --name imars3d python=3.8
conda activate imars3d
conda install pytest pyyaml numpy scipy matplotlib astropy mpi4py mpich psutil scikit-image tomopy dxchange progressbar2 ipywe
python setup.py develop