initial commit

83853998 · Mccaskey, Alex · 83853998 · 83853998 · 83853998 · 83853998
Commit 83853998 authored Nov 11, 2016 by Mccaskey, Alex
--- a/.gitignore
+++ b/.gitignore
+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Precompiled Headers
+*.gch
+*.pch
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Fortran module files
+*.mod
+*.smod
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Executables
+*.exe
+*.out
+*.app
+/build/
+/.cproject
+/.project
--- a/.travis.yml
+++ b/.travis.yml
+sudo: required
+
+services:
+  - docker
+
+before_install:
+  - docker pull hello-world
+  - docker run
+        --detach --tty
+        --name=test-machine
+        --volume ${TRAVIS_BUILD_DIR}:/scratch/source/xacc
+        --env TRAVIS_PULL_REQUEST=${TRAVIS_PULL_REQUEST}
+        --env CTEST_BUILD_NAME="$(curl -s https://raw.githubusercontent.com/ORNL-CEES/Cap/master/docker/get_build_info.sh | bash)"
+        hello-world
+  - docker ps -a
+  - env
+
+script:
+  - echo "Hello World"
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
+project(XACC CXX)
+cmake_minimum_required(VERSION 2.8)
+set(CMAKE_DISABLE_IN_SOURCE_BUILDS ON)
+set(CMAKE_DISABLE_SOURCE_CHANGES ON)
+set(CMAKE_STANDARD_REQUIRED ON)
+set(CMAKE_CXX_STANDARD 11)
+message(STATUS "C++ version ${CXX_STANDARD} configured.")
+
+set(CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} "${CMAKE_SOURCE_DIR}/cmake/Modules")
+
+if (EXISTS ${CMAKE_SOURCE_DIR}/tpls/common)
+  message(STATUS "Common found in tpls")
+  set(CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} "${CMAKE_SOURCE_DIR}/tpls/common/tpls/fire/cmake/Modules")
+  include(tests)
+endif() 
+
+find_package(MPI REQUIRED)
+find_package(Boost COMPONENTS system REQUIRED)
+
+message(STATUS "Found Boost Headers = ${Boost_INCLUDE_DIRS}")
+message(STATUS "Found Boost Libraries = ${Boost_LIBRARIES}")
+
+find_package(OpenMP)
+if (OPENMP_FOUND)
+  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
+endif()
+
+include_directories(${MPI_INCLUDE_PATH})
+include_directories(${Boost_INCLUDE_DIRS})
+include_directories("${CMAKE_SOURCE_DIR}/xacc")
+include_directories("${CMAKE_SOURCE_DIR}/tpls/common/factory")
+include_directories("${CMAKE_SOURCE_DIR}/tpls/common/graph")
+
+add_subdirectory(tpls)
+add_subdirectory(xacc)
--- a/README.md
+++ b/README.md
+# XACC - e***X***treme-scale ***ACC***elerator programming framework
+
+XACC is a programming framework for extreme-scale, post-exascale accelerator architectures that integrates alongside existing conventional applications. It is a pluggable framework for programming languages developed for next-gen computing hardware architectures like quantum and neuromorphic computing. It lets computational scientists efficiently off-load classically intractable work to attached accelerators through user-friendly Kernel definitions. XACC makes post-exascale hybrid programming approachable for domain computational scientists.
+
--- a/cmake/README.md
+++ b/cmake/README.md
--- a/docker/README.md
+++ b/docker/README.md
--- a/docs/.gitignore
+++ b/docs/.gitignore
+_site
+.sass-cache
+.jekyll-metadata
--- a/docs/Gemfile
+++ b/docs/Gemfile
+source 'https://rubygems.org'
+
+# Ascii Doctor and PlantUML
+gem 'jekyll', '~> 2.5'
+gem 'asciidoctor', '~> 1.5'
+gem 'coderay', '1.1.0'
+gem 'rake-jekyll', '~> 1.0'
+gem 'jekyll-plantuml', '~> 1.1' 
+
+group :jekyll_plugins do
+  gem "jekyll-asciidoc"
+  gem 'asciidoctor-diagram' 
+end
+
+# Configure the gem for working with GitHub Pages
+#gem 'github-pages', group: :jekyll_plugins
+
--- a/docs/Gemfile.lock
+++ b/docs/Gemfile.lock
+GEM
+  remote: https://rubygems.org/
+  specs:
+    addressable (2.4.0)
+    asciidoctor (1.5.4)
+    asciidoctor-diagram (1.5.1)
+      asciidoctor (~> 1.5.0)
+    blankslate (2.1.2.4)
+    classifier-reborn (2.0.4)
+      fast-stemmer (~> 1.0)
+    coderay (1.1.0)
+    coffee-script (2.4.1)
+      coffee-script-source
+      execjs
+    coffee-script-source (1.10.0)
+    colorator (0.1)
+    execjs (2.7.0)
+    faraday (0.9.2)
+      multipart-post (>= 1.2, < 3)
+    fast-stemmer (1.0.2)
+    ffi (1.9.14)
+    jekyll (2.5.3)
+      classifier-reborn (~> 2.0)
+      colorator (~> 0.1)
+      jekyll-coffeescript (~> 1.0)
+      jekyll-gist (~> 1.0)
+      jekyll-paginate (~> 1.0)
+      jekyll-sass-converter (~> 1.0)
+      jekyll-watch (~> 1.1)
+      kramdown (~> 1.3)
+      liquid (~> 2.6.1)
+      mercenary (~> 0.3.3)
+      pygments.rb (~> 0.6.0)
+      redcarpet (~> 3.1)
+      safe_yaml (~> 1.0)
+      toml (~> 0.1.0)
+    jekyll-asciidoc (2.0.1)
+      asciidoctor (>= 1.5.0)
+      jekyll (>= 2.3.0)
+    jekyll-coffeescript (1.0.1)
+      coffee-script (~> 2.2)
+    jekyll-gist (1.4.0)
+      octokit (~> 4.2)
+    jekyll-paginate (1.1.0)
+    jekyll-plantuml (1.3.1)
+      jekyll (> 2.0)
+    jekyll-sass-converter (1.4.0)
+      sass (~> 3.4)
+    jekyll-watch (1.5.0)
+      listen (~> 3.0, < 3.1)
+    kramdown (1.12.0)
+    liquid (2.6.3)
+    listen (3.0.8)
+      rb-fsevent (~> 0.9, >= 0.9.4)
+      rb-inotify (~> 0.9, >= 0.9.7)
+    mercenary (0.3.6)
+    multipart-post (2.0.0)
+    octokit (4.3.0)
+      sawyer (~> 0.7.0, >= 0.5.3)
+    parslet (1.5.0)
+      blankslate (~> 2.0)
+    posix-spawn (0.3.11)
+    pygments.rb (0.6.3)
+      posix-spawn (~> 0.3.6)
+      yajl-ruby (~> 1.2.0)
+    rake (10.5.0)
+    rake-jekyll (1.1.0)
+      rake (~> 10.0)
+    rb-fsevent (0.9.7)
+    rb-inotify (0.9.7)
+      ffi (>= 0.5.0)
+    redcarpet (3.3.4)
+    safe_yaml (1.0.4)
+    sass (3.4.22)
+    sawyer (0.7.0)
+      addressable (>= 2.3.5, < 2.5)
+      faraday (~> 0.8, < 0.10)
+    toml (0.1.2)
+      parslet (~> 1.5.0)
+    yajl-ruby (1.2.1)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  asciidoctor (~> 1.5)
+  asciidoctor-diagram
+  coderay (= 1.1.0)
+  jekyll (~> 2.5)
+  jekyll-asciidoc
+  jekyll-plantuml (~> 1.1)
+  rake-jekyll (~> 1.0)
+
+BUNDLED WITH
+   1.13.2
--- a/docs/LICENSE.txt
+++ b/docs/LICENSE.txt
+#----------------------------------------------------------------------------
+Original License for the Gravity Theme for Jekyll. My modifications are 
+released under the same license.
+
+Alex McCaskey
+20161006
+#----------------------------------------------------------------------------
+
+MIT License
+
+Copyright (c) 2016 Hemang Kumar
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+
--- a/docs/_config.yml
+++ b/docs/_config.yml
+# Welcome to Jekyll!
+#
+# This config file is meant for settings that affect your whole blog, values
+# which you are expected to set up once and rarely need to edit after that.
+# For technical reasons, this file is *NOT* reloaded automatically when you use
+# 'jekyll serve'. If you change this file, please restart the server process.
+
+title: XACC
+email: hemangsk@gmail.com
+description: "A framework for programming extreme-scale accelerators for Post-Moore's Law heterogeneous computing."
+url: "https://ORNL-QCI.github.io"
+baseurl: "/xacc"
+twitter_username: amccaskey2223
+github_username:  amccaskey
+
+# Build settings
+markdown: kramdown
+
+# Sass support
+sass:
+    sass_dir: _sass
--- a/docs/_includes/footer.html
+++ b/docs/_includes/footer.html
+<footer class="site-footer">
+
+  <div class="wrapper">
+
+    <h2 class="footer-heading small-site-title">{{ site.title }}</h2>
+
+    <div class="footer-col-wrapper">
+      <div class="footer-col footer-col-1">
+        <ul class="contact-list footer-content">
+          <li>Powered By <a href="http://github.com/hemangsk/Gravity">Gravity</a></li>
+          <li>Made with <i class="fa fa-heart"></i> on <a href="http://jekyllrb.com"><span style="color:black">{ { Jekyll } }</a></span></li>
+
+
+        </ul>
+      </div>
+
+      <div class="footer-col footer-col-2 footer-content">
+        <ul class="social-media-list">
+          {% if site.github_username %}
+          <li>
+            {% include icon-github.html username=site.github_username %}
+          </li>
+          {% endif %}
+
+          {% if site.twitter_username %}
+          <li>
+            {% include icon-twitter.html username=site.twitter_username %}
+          </li>
+          {% endif %}
+        </ul>
+      </div>
+
+      <div class="footer-col footer-col-3 site-description">
+        <p>{{ site.description }}</p>
+      </div>
+    </div>
+
+  </div>
+
+</footer>
--- a/docs/_includes/head.html
+++ b/docs/_includes/head.html
+<head>
+  <meta charset="utf-8">
+  <meta http-equiv="X-UA-Compatible" content="IE=edge">
+  <meta name="viewport" content="width=device-width, initial-scale=1">
+
+  <title>{% if page.title %}{{ page.title | escape }}{% else %}{{ site.title | escape }}{% endif %}</title>
+  <meta name="description" content="{% if page.excerpt %}{{ page.excerpt | strip_html | strip_newlines | truncate: 160 }}{% else %}{{ site.description }}{% endif %}">
+  <link href='https://fonts.googleapis.com/css?family=PT+Sans:400,700,400italic,700italic|Source+Sans+Pro:400,700,200,300|Josefin+Sans:400,600,700,300' rel='stylesheet' type='text/css'>
+  <link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.5.0/css/font-awesome.min.css" rel="stylesheet">
+
+  <link rel="stylesheet" href="{{ "/css/style.css" | prepend: site.baseurl }}">
+  <link rel="canonical" href="{{ page.url | replace:'index.html','' | prepend: site.baseurl | prepend: site.url }}">
+  <link rel="alternate" type="application/rss+xml" title="{{ site.title }}" href="{{ "/feed.xml" | prepend: site.baseurl | prepend: site.url }}">
+</head>
--- a/docs/_includes/header.html
+++ b/docs/_includes/header.html
+
+<div class="wrapper">
+  <center> <a href="{{site.baseurl}}/index.html"><div class="site-title">{{site.title}}</div></a></center>
+</div>
+<div class="wrapper site-description">
+<center>{{site.description}}</center>
+</div>
+<center>
+<div class="wrapper">
+  <div class="trigger site-navigation">
+    <a class="page-link" href="{{site.url}}{{site.baseurl}}">HOME</a><span class="exclamationMark">/</span>
+
+    <!-- Add each .md file with the "page" layout -->
+    {% for sitePage in site.pages %}
+    {% if sitePage.title %}
+
+    <a class="page-link" href="{{sitePage.url | prepend: site.baseurl }}">{{sitePage.title}}</a><span class="exclamationMark">/</span>
+    {% endif %}
+    {% endfor %}
+
+    <!-- Add the download hard link -->
+    <a class="page-link" href="https://github.com/ORNL-QCI/xacc">Download</a><span class="exclamationMark">
+  </div>
+</div>
+</center>
--- a/docs/_includes/icon-github.html
+++ b/docs/_includes/icon-github.html
+<a href="https://github.com/{{ include.username }}"><span class="icon icon--github">{% include icon-github.svg %}</span><span class="username">{{ include.username }}</span></a>
--- a/docs/_includes/icon-github.svg
+++ b/docs/_includes/icon-github.svg
+<svg viewBox="0 0 16 16"><path fill="#828282" d="M7.999,0.431c-4.285,0-7.76,3.474-7.76,7.761 c0,3.428,2.223,6.337,5.307,7.363c0.388,0.071,0.53-0.168,0.53-0.374c0-0.184-0.007-0.672-0.01-1.32 c-2.159,0.469-2.614-1.04-2.614-1.04c-0.353-0.896-0.862-1.135-0.862-1.135c-0.705-0.481,0.053-0.472,0.053-0.472 c0.779,0.055,1.189,0.8,1.189,0.8c0.692,1.186,1.816,0.843,2.258,0.645c0.071-0.502,0.271-0.843,0.493-1.037 C4.86,11.425,3.049,10.76,3.049,7.786c0-0.847,0.302-1.54,0.799-2.082C3.768,5.507,3.501,4.718,3.924,3.65 c0,0,0.652-0.209,2.134,0.796C6.677,4.273,7.34,4.187,8,4.184c0.659,0.003,1.323,0.089,1.943,0.261 c1.482-1.004,2.132-0.796,2.132-0.796c0.423,1.068,0.157,1.857,0.077,2.054c0.497,0.542,0.798,1.235,0.798,2.082 c0,2.981-1.814,3.637-3.543,3.829c0.279,0.24,0.527,0.713,0.527,1.437c0,1.037-0.01,1.874-0.01,2.129 c0,0.208,0.14,0.449,0.534,0.373c3.081-1.028,5.302-3.935,5.302-7.362C15.76,3.906,12.285,0.431,7.999,0.431z"/></svg>
--- a/docs/_includes/icon-twitter.html
+++ b/docs/_includes/icon-twitter.html
+<a href="https://twitter.com/{{ include.username }}"><span class="icon icon--twitter">{% include icon-twitter.svg %}</span><span class="username">{{ include.username }}</span></a>
--- a/docs/_includes/icon-twitter.svg
+++ b/docs/_includes/icon-twitter.svg
+<svg viewBox="0 0 16 16"><path fill="#828282" d="M15.969,3.058c-0.586,0.26-1.217,0.436-1.878,0.515c0.675-0.405,1.194-1.045,1.438-1.809c-0.632,0.375-1.332,0.647-2.076,0.793c-0.596-0.636-1.446-1.033-2.387-1.033c-1.806,0-3.27,1.464-3.27,3.27 c0,0.256,0.029,0.506,0.085,0.745C5.163,5.404,2.753,4.102,1.14,2.124C0.859,2.607,0.698,3.168,0.698,3.767 c0,1.134,0.577,2.135,1.455,2.722C1.616,6.472,1.112,6.325,0.671,6.08c0,0.014,0,0.027,0,0.041c0,1.584,1.127,2.906,2.623,3.206 C3.02,9.402,2.731,9.442,2.433,9.442c-0.211,0-0.416-0.021-0.615-0.059c0.416,1.299,1.624,2.245,3.055,2.271 c-1.119,0.877-2.529,1.4-4.061,1.4c-0.264,0-0.524-0.015-0.78-0.046c1.447,0.928,3.166,1.469,5.013,1.469 c6.015,0,9.304-4.983,9.304-9.304c0-0.142-0.003-0.283-0.009-0.423C14.976,4.29,15.531,3.714,15.969,3.058z"/></svg>
--- a/docs/_layouts/archive.html
+++ b/docs/_layouts/archive.html
+---
+layout: page
+---
+
+
+{% for post in site.posts %}
+{% for cat in post.categories %}
+{% if cat == page.category %}
+
+
+
+<div class="post postContent">
+  <div  class="postDate"><time datetime="{{ post.date | date_to_xmlschema }}" itemprop="datePublished">{{ post.date | date: "%b %-d, %Y" }}</time>
+  </div>
+  <div class="postDay">
+    {{post.tag}}
+  </div>
+  <br>
+  <div class="postTitle">
+  <a class='postLink' href="{{site.url}}{{site.baseurl}}{{post.url}}">{{post.title}}</a>
+  </div>
+  <div class="postExt">
+    {{post.excerpt}}
+  </div>
+</div>
+{% endif %}
+{% endfor %}
+
+{% endfor %}
--- a/docs/_layouts/default.html
+++ b/docs/_layouts/default.html
+<!DOCTYPE html>
+<html>
+
+  {% include head.html %}
+
+  <body>
+
+    {% include header.html %}
+
+    <div class="page-content">
+      <div class="wrapper">
+        {{ content }}
+      </div>
+    </div>
+
+    {% include footer.html %}
+
+  </body>
+
+</html>