Memory

Always check for python dev libs when ADIOS2_HAVE_PYTHON is TRUE

Fixes #193

Picking up config.xml from examples/heatTransfer/write/config.xml from
./build/bin/heatTransfer_write_adios2

const_cast added to MPI_Isend due to void* signature

Increased Default Maximum Memory to 200Mb
Added config.xml for the heat transfer example for memory management
(among other parameters) at runtime 

To do:
Copy config.xml to /build/bin, right now the heat transfer example won't
run in config.xml is not found

Fix compatibility issues with CMake v3.5

Fixes #175 (again)

Adjust error handling for consistency

use adios_config -l and adios_config -c separately in FindADIOS1 script

fix examples for the release branch

Solve Issue #180 Modified file transports to enable write loop in size > 2Gb

Checking std::ios_base::failure exceptions
IOChrono is off by default, each owner turns it on explicitly
Modified FileDescriptor and FilePointer destructors
Added Tests BPWriteRead for stdio and fstream
Removed IO AddTransport with vector (shoud have been there?) to enable
AddTransport in Tests

Setup library versioning.

Fixes #152

Switch to pugixml

Use a newer upstream version of FindBZip2

Fixes #175

Use kwsys as object lib

Solve Issue #171, bug when using threaded operations

Solve Issue #171 in IO SetParameters and AddTransport

WIP: Added working python types test

Keep only std::map<std::string, std::string> initializer list.
Corrected examples. 

Replace std::copy with std::memcpy in std::thread
Added threads to profiling.log
Limiting the use of threads

TO DO: large scale runs to enforce threads policy

Makes missing xml file permissive

Fixes #151

* upstream-KWSys:
  KWSys 2017-06-22 (ab645c94)

KWSys Upstream authored 7 years ago and Atkins, Charles Vernon committed 7 years ago

Code extracted from:

    https://gitlab.kitware.com/chuck.atkins/kwsys.git

at commit ab645c94b6b02922248fbca1e7ac9355a0055391 (ab645c9).

Upstream Shortlog
-----------------

Adam Weisi (3):
      8a799e36 Process: Improve definition ordering in header file
      7d56ef24 Process: Save results from all children internally
      b7eba998 Process: Add APIs to get results of individual processes

Ben Boeckel (4):
      ac0c67d2 gitattributes: indicate attributes to ignore when importing
      3dfeb55e gitattributes: rename the c-style attribute
      cea71543 style: remove separator comments
      874dc559 style: help clang-format near macros

Brad King (4):
      edd8b5e0 FStream: Open files on Windows using UNC path
      c23e388b ConsoleBuf: Avoid signed/unsigned comparison
      51859eab CONTRIBUTING: Specify clang-format version used for code style
      7e04a3d2 SystemTools: Remove RemoveEmptyPathElements method

Chuck Atkins (2):
      51e95ba7 XL: Fix compatibility with newer clang-based XL on Linux
      ab645c94 Add an option to split object and interface libs.

Daniel Pfeifer (2):
      2564822b Disable clang-tidy
      0f7ec930 Pass std::string as const&

Florian Maushart (2):
      684bcda6 SystemInformation: Expose CPU feature flags publicly
      70b8332f SystemInformation: Add CPU_FEATURE_FPU flag

Matteo Settenvini (1):
      6173f4b3 SystemTools: Add function to remove empty path components

Pavel Solodovnikov (2):
      36d14691 Access string npos without instance
      ab265991 Remove second arg: npos in substr usages