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Podhorszki, Norbert
ADIOS2
Commits
3d8da1ad
Commit
3d8da1ad
authored
7 years ago
by
Atkins, Charles Vernon
Committed by
Wittenburg, William
7 years ago
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Removed unneeded ohpc packages and fixed ADIOS1 build
parent
e68db671
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1 merge request
!253
Finish image buildout
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3d8da1ad
FROM
centos:centos7
.3.1611
FROM
centos:centos7
RUN
yum
-y
update
&&
\
yum
-y
install
\
bzip2-devel.x86_64
\
curl
\
gcc
\
gcc-c++
\
gcc-gfortran
\
git
\
gmake
\
hdf5-devel.x86_64
\
numpy.x86_64
\
python-devel.x86_64
\
https://github.com/openhpc/ohpc/releases/download/v1.3.GA/ohpc-release-1.3-1.el7.x86_64.rpm
# Install extra repos
RUN
yum
-y
install
epel-release https://github.com/openhpc/ohpc/releases/download/v1.3.GA/ohpc-release-1.3-1.el7.x86_64.rpm
&&
\
yum
-y
upgrade
RUN
yum
-y
update
&&
\
yum
-y
install
\
czmq-devel
\
mpi4py-openmpi.x86_64
\
ohpc-base
\
openmpi-gnu7-ohpc
\
phdf5-gnu7-openmpi-ohpc
\
netcdf-gnu7-openmpi-ohpc
# Install core dev packages
RUN
yum
-y
install
\
curl file
\
gcc gcc-c++ gcc-gfortran
\
git make autoconf automake libtool
\
bzip2-devel zeromq-devel hdf5-devel
\
python-devel numpy
WORKDIR
/home/adios2
# Now get some packages from source and build them, starting with CMake
RUN
curl
-O
https://cmake.org/files/v3.6/cmake-3.6.0-Linux-x86_64.tar.gz
&&
\
mkdir
-p
/opt/cmake
&&
\
cd
/opt/cmake
&&
\
tar
-zxvf
/home/adios2/cmake-3.6.0-Linux-x86_64.tar.gz
&&
\
rm
-rf
/home/adios2/cmake-3.6.0-Linux-x86_64.tar.gz
&&
\
ln
-s
/opt/cmake/cmake-3.6.0-Linux-x86_64/bin/cmake /usr/local/bin/cmake
&&
\
ln
-s
/opt/cmake/cmake-3.6.0-Linux-x86_64/bin/cpack /usr/local/bin/cpack
&&
\
ln
-s
/opt/cmake/cmake-3.6.0-Linux-x86_64/bin/ctest /usr/local/bin/ctest
&&
\
# Install gcc7 OpenHPC packages
RUN
yum
-y
install
\
lmod-ohpc gnu7-compilers-ohpc openmpi-gnu7-ohpc phdf5-gnu7-openmpi-ohpc
\
python-numpy-gnu7-ohpc
# Clone and build zfp master
# Install the CMake binary
WORKDIR
/opt/cmake/3.6.0
RUN
curl
-L
https://cmake.org/files/v3.6/cmake-3.6.0-Linux-x86_64.tar.gz |
\
tar
--strip-components
=
1
-xzv
mkdir /opt/zfp && \
cd
/opt/zfp
&& \
mkdir build install && \
# ZFP
WORKDIR
/opt/zfp
RUN
mkdir
build
install
&&
\
git clone https://github.com/LLNL/zfp.git src
&&
\
cd
build
&&
\
cmake -DCMAKE_INSTALL_PREFIX:String=/opt/zfp/install ../src/ && \
make install && \
/opt/cmake/3.6.0/bin/cmake
\
-DCMAKE_INSTALL_PREFIX
=
/opt/zfp/install
\
../src
&&
\
make
-j8
install
&&
\
cd
../
&&
\
rm -rf build src
&& \
rm
-rf
build src
#
Clone ADIOS1 and build two versions
#
ADIOS1
mkdir -p /opt/adios1/1.12.0 && \
cd /opt/adios1/1.12.0 && \
curl -OL https://github.com/ornladios/ADIOS/archive/v1.12.0.tar.gz && \
tar -zxvf v1.12.0.tar.gz && \
# Source setup
WORKDIR
/opt/adios1/1.12.0
RUN
mkdir source
&&
\
curl
-L
https://github.com/ornladios/ADIOS/archive/v1.12.0.tar.gz |
\
tar
-C
source
--strip-components
=
1
-xzv
&&
\
cd source
&&
./autogen.sh
# GCC 4.8
RUN
cd source
&&
\
CFLAGS
=
"-O2 -fPIC"
CXXFLAGS
=
"-O2 -fPIC"
FCFLAGS
=
"-O2 -fPIC"
\
./configure
--prefix
=
/opt/adios1/1.12.0/gnu48
--without-mpi
&&
\
make
-j8
install
&&
\
make distclean
mkdir build-gnu-485 build-gnu-710 && \
mkdir gnu-4.8.5 gnu-7.1.0 && \
cd build-gnu-485 && \
# GCC 7
RUN
cd source
&&
\
.
/etc/profile
&&
\
module load gnu7 openmpi phdf5
&&
\
CFLAGS
=
"-O2 -fPIC"
CXXFLAGS
=
"-O2 -fPIC"
FCFLAGS
=
"-O2 -fPIC"
\
./configure
--prefix
=
/opt/adios1/1.12.0/gnu7_openmpi
&&
\
make
-j8
install
cd /opt/adios1/1.12.0 && \
rm -rf
ADIOS-1.12.0 build-gnu-485 build-gnu-710 v1.12.0.tar.gz && \
# Cleanup
RUN
rm
-rf
/opt/adios1/1.12.0/source
# Make the directory where CircleCI can clone the ADIOS2 source
mkdir -p /home/adios2/hidecirclesource
RUN
mkdir
-p
/home/adios2/source
WORKDIR
/home/adios2
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