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/*
* Distributed under the OSI-approved Apache License, Version 2.0. See
* accompanying file Copyright.txt for details.
*
* DataManBase.cpp
*
* Created on: Apr 12, 2017
* Author: Jason Wang
*/
#include "DataManBase.h"
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#include <sstream>
#include <adios2sys/DynamicLoader.hxx>
struct DataManBase::ManagerLibrary
{
adios2sys::DynamicLoader::LibraryHandle m_LibraryHandle;
DataManBase *(*m_getManFunc)();
ManagerLibrary(std::string method)
{
std::stringstream libNameBuilder;
libNameBuilder << adios2sys::DynamicLoader::LibPrefix() << method
<< "man" << adios2sys::DynamicLoader::LibExtension();
std::string libName = libNameBuilder.str();
// Bind to the dynamic library
m_LibraryHandle = adios2sys::DynamicLoader::OpenLibrary(libName);
if (!m_LibraryHandle)
{
throw std::runtime_error("Unable to locate the " + libName +
" library.");
}
// Bind to the getMan symbol
adios2sys::DynamicLoader::SymbolPointer symbolHandle =
adios2sys::DynamicLoader::GetSymbolAddress(m_LibraryHandle,
"getMan");
if (!symbolHandle)
{
throw std::runtime_error("Unable to locate the getMan symbol in " +
libName);
}
m_getManFunc = reinterpret_cast<DataManBase *(*)()>(symbolHandle);
}
~ManagerLibrary()
{
if (m_LibraryHandle)
{
adios2sys::DynamicLoader::CloseLibrary(m_LibraryHandle);
}
}
};
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DataManBase::DataManBase()
{
m_profiling["total_manager_time"] = 0.0f;
m_profiling["total_mb"] = 0.0f;
m_start_time = std::chrono::system_clock::now();
}
int DataManBase::put(const void *p_data, std::string p_doid, std::string p_var,
std::string p_dtype, std::vector<size_t> p_putshape,
std::vector<size_t> p_varshape,
std::vector<size_t> p_offset, size_t p_timestep,
int p_tolerance, int p_priority)
{
json msg;
msg["doid"] = p_doid;
msg["var"] = p_var;
msg["dtype"] = p_dtype;
msg["putshape"] = p_putshape;
msg["putbytes"] = product(p_putshape, dsize(p_dtype));
msg["varshape"] = p_varshape;
msg["varbytes"] = product(p_varshape, dsize(p_dtype));
msg["offset"] = p_offset;
msg["timestep"] = p_timestep;
msg["tolerance"] = p_tolerance;
msg["priority"] = p_priority;
return put(p_data, msg);
}
int DataManBase::put_begin(const void *p_data, json &p_jmsg)
{
check_shape(p_jmsg);
p_jmsg["profiling"] = m_profiling;
m_step_time = std::chrono::system_clock::now();
return 0;
}
int DataManBase::put_end(const void *p_data, json &p_jmsg)
{
auto end = std::chrono::system_clock::now();
std::chrono::duration<double> duration = end - m_step_time;
m_profiling["total_manager_time"] =
m_profiling["total_manager_time"].get<double>() + duration.count();
m_profiling["total_mb"] =
m_profiling["total_mb"].get<size_t>() +
product(p_jmsg["varshape"], dsize(p_jmsg["dtype"])) / 1000000.0f;
duration = end - m_start_time;
m_profiling["total_workflow_time"] = duration.count();
m_profiling["workflow_mbs"] =
m_profiling["total_mb"].get<double>() /
m_profiling["total_workflow_time"].get<double>();
m_profiling["manager_mbs"] =
m_profiling["total_mb"].get<double>() /
m_profiling["total_manager_time"].get<double>();
if (p_jmsg["compressed_size"] != nullptr)
p_jmsg["putbytes"] = p_jmsg["compressed_size"].get<size_t>();
put_next(p_data, p_jmsg);
return 0;
}
int DataManBase::get(void *p_data, std::string p_doid, std::string p_var,
std::string p_dtype, std::vector<size_t> p_getshape,
std::vector<size_t> p_varshape,
std::vector<size_t> p_offset, size_t p_timestep)
{
json msg;
msg["doid"] = p_doid;
msg["var"] = p_var;
msg["dtype"] = p_dtype;
msg["getshape"] = p_getshape;
msg["varshape"] = p_varshape;
msg["offset"] = p_offset;
msg["timestep"] = p_timestep;
return get(p_data, msg);
}
int DataManBase::get(void *p_data, std::string p_doid, std::string p_var,
std::string &p_dtype, std::vector<size_t> &p_varshape,
size_t &p_timestep)
{
json msg;
msg["doid"] = p_doid;
msg["var"] = p_var;
return get(p_data, msg);
}
void DataManBase::reg_callback(
std::function<void(const void *, std::string, std::string, std::string,
std::vector<size_t>)>
cb)
{
if (m_next.size() == 0)
{
m_callback = cb;
}
else
{
for (auto i : m_next)
{
i.second->reg_callback(cb);
}
}
}
void DataManBase::dump(const void *p_data, json p_jmsg, std::ostream &out)
{
std::vector<size_t> p_varshape =
p_jmsg["varshape"].get<std::vector<size_t>>();
std::string dtype = p_jmsg["dtype"];
size_t length = p_jmsg["dumplength"].get<size_t>();
size_t s = 0;
for (size_t i = 0; i < product(p_varshape, 1); i++)
{
s++;
out << ((float *)p_data)[i] << " ";
if (s == length)
{
out << std::endl;
s = 0;
}
}
out << std::endl;
}
void DataManBase::add_next(std::string p_name,
std::shared_ptr<DataManBase> p_next)
{
m_next[p_name] = p_next;
}
void DataManBase::remove_next(std::string p_name) { m_next.erase(p_name); }
bool DataManBase::have_next()
{
if (m_next.size() == 0)
{
return false;
}
else
{
return true;
}
}
void DataManBase::print_next(std::ostream &out)
{
for (auto i : m_next)
{
out << i.second->name() << " -> ";
i.second->print_next();
out << std::endl;
}
}
bool DataManBase::auto_transform(const void *p_in, void *p_out, json &p_jmsg)
{
if (p_jmsg["compression_method"] != nullptr)
{
auto method = p_jmsg["compression_method"];
auto man = get_man(method);
if (man == nullptr)
{
logging("Library file for compression method " +
p_jmsg["compression_method"].dump() + " not found!");
return false;
}
man->transform(p_in, p_out, p_jmsg);
p_jmsg.erase("compression_method");
p_jmsg.erase("compression_rate");
p_jmsg.erase("compressed_size");
return true;
}
else
{
return false;
}
}
void DataManBase::add_man_to_path(std::string p_new, std::string p_path)
{
if (m_next.count(p_path) > 0)
{
auto man = get_man(p_new);
if (man)
{
man->add_next(p_path, m_next[p_path]);
this->add_next(p_new, man);
this->remove_next(p_path);
}
}
}
int DataManBase::flush_next()
{
for (auto i : m_next)
{
i.second->flush();
}
return 0;
}
int DataManBase::put_next(const void *p_data, json p_jmsg)
{
for (auto i : m_next)
{
i.second->put(p_data, p_jmsg);
}
return 0;
}
std::shared_ptr<DataManBase> DataManBase::get_man(std::string method)
{
// Reuse already loaded libraries if possible
auto libIt = m_LoadedManagers.find(method);
if (libIt == m_LoadedManagers.end())
// This insertion will only fail if an entry for method already
// exists, which this if block ensures that it doesn't.
libIt =
m_LoadedManagers.insert({method, new ManagerLibrary(method)})
.first;
return std::shared_ptr<DataManBase>(libIt->second->m_getManFunc());
catch (const std::runtime_error &ex)
logging(ex.what());
return nullptr;