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* Distributed under the OSI-approved Apache License, Version 2.0. See
* accompanying file Copyright.txt for details.
*
* DataMan.cpp
*
* Created on: Jan 10, 2017
* Author: wfg
*/
#include <iostream> //needs to go away, this is just for demo purposes
#include "engine/dataman/DataManWriter.h"
#include "core/Support.h"
#include "functions/adiosFunctions.h" //CSVToVector
// supported transports
#include "transport/file/FStream.h" // uses C++ fstream
#include "transport/wan/MdtmMan.h" //uses Mdtm library
namespace adios
{
DataManWriter::DataManWriter(ADIOS &adios, const std::string name,
const std::string accessMode, MPI_Comm mpiComm,
const Method &method)
: Engine(adios, "DataManWriter", name, accessMode, mpiComm, method,
" DataManWriter constructor (or call to ADIOS Open).\n"),
m_Buffer(accessMode, m_RankMPI, m_DebugMode)
}
void DataManWriter::SetCallBack(
std::function<void(const void *, std::string, std::string, std::string,
Dims)>
callback)
{
m_CallBack = callback;
m_Man.reg_callback(callback);
}
void DataManWriter::Write(Variable<char> &variable, const char *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<unsigned char> &variable,
const unsigned char *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<short> &variable, const short *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<unsigned short> &variable,
const unsigned short *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<int> &variable, const int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<unsigned int> &variable,
const unsigned int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<long int> &variable, const long int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<unsigned long int> &variable,
const unsigned long int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<long long int> &variable,
const long long int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<unsigned long long int> &variable,
const unsigned long long int *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<float> &variable, const float *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<double> &variable, const double *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<long double> &variable,
const long double *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<std::complex<float>> &variable,
const std::complex<float> *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<std::complex<double>> &variable,
const std::complex<double> *values)
{
WriteVariableCommon(variable, values);
}
void DataManWriter::Write(Variable<std::complex<long double>> &variable,
const std::complex<long double> *values)
{
WriteVariableCommon(variable, values);
void DataManWriter::Write(const std::string &variableName, const char *values)
WriteVariableCommon(m_ADIOS.GetVariable<char>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<unsigned char>(variableName),
values);
void DataManWriter::Write(const std::string &variableName, const short *values)
WriteVariableCommon(m_ADIOS.GetVariable<short>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<unsigned short>(variableName),
values);
void DataManWriter::Write(const std::string &variableName, const int *values)
WriteVariableCommon(m_ADIOS.GetVariable<int>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<unsigned int>(variableName),
values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<long int>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<unsigned long int>(variableName),
values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<long long int>(variableName),
values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(
m_ADIOS.GetVariable<unsigned long long int>(variableName), values);
void DataManWriter::Write(const std::string &variableName, const float *values)
WriteVariableCommon(m_ADIOS.GetVariable<float>(variableName), values);
void DataManWriter::Write(const std::string &variableName, const double *values)
WriteVariableCommon(m_ADIOS.GetVariable<double>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<long double>(variableName), values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<std::complex<float>>(variableName),
values);
void DataManWriter::Write(const std::string &variableName,
WriteVariableCommon(m_ADIOS.GetVariable<std::complex<double>>(variableName),
values);
void DataManWriter::Write(const std::string &variableName,
const std::complex<long double> *values)
{
WriteVariableCommon(
m_ADIOS.GetVariable<std::complex<long double>>(variableName), values);
}
void DataManWriter::Close(const int transportIndex)
{
m_Man.flush();
// here close IPs and deallocate or free/close resources (if using STL no
// need
// for memory deallocation)
}
// PRIVATE functions below
void DataManWriter::Init()
{
if (m_DebugMode == true)
{
if (m_AccessMode != "w" && m_AccessMode != "write" &&
m_AccessMode != "a" && m_AccessMode != "append")
throw std::invalid_argument(
"ERROR: DataManWriter doesn't support access mode " +
m_AccessMode +
", in call to ADIOS Open or DataManWriter constructor\n");
}
auto itRealTime = m_Method.m_Parameters.find("real_time");
if (itRealTime != m_Method.m_Parameters.end())
if (itRealTime->second == "yes" || itRealTime->second == "true")
m_DoRealTime = true;
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itRealTime = m_Method.m_Parameters.find("monitoring");
if (itRealTime != m_Method.m_Parameters.end())
{
if (itRealTime->second == "yes" || itRealTime->second == "true")
m_DoMonitor = true;
}
if (m_DoRealTime)
{
/**
* Lambda function that assigns a parameter in m_Method to a
* localVariable
* of type std::string
*/
auto lf_AssignString = [this](const std::string parameter,
std::string &localVariable) {
auto it = m_Method.m_Parameters.find(parameter);
if (it != m_Method.m_Parameters.end())
{
localVariable = it->second;
}
};
/**
* Lambda function that assigns a parameter in m_Method to a
* localVariable
* of type int
*/
auto lf_AssignInt = [this](const std::string parameter,
int &localVariable) {
auto it = m_Method.m_Parameters.find(parameter);
if (it != m_Method.m_Parameters.end())
{
localVariable = std::stoi(it->second);
}
};
auto is_number = [](const std::string &s) {
return !s.empty() && std::find_if(s.begin(), s.end(), [](char c) {
return !std::isdigit(c);
}) == s.end();
};
json jmsg;
for (auto &i : m_Method.m_Parameters)
{
if (is_number(i.second))
{
jmsg[i.first] = std::stoi(i.second);
}
else
{
jmsg[i.first] = i.second;
}
}
jmsg["stream_mode"] = "sender";
m_Man.add_stream(jmsg);
std::string method_type;
int num_channels = 0;
lf_AssignString("method_type", method_type);
lf_AssignInt("num_channels", num_channels);
}
else
{
InitTransports();
}
}
void DataManWriter::InitTransports() // maybe move this?
{
for (const auto ¶meters : m_Method.m_TransportParameters)
auto itTransport = parameters.find("transport");
if (itTransport->second == "Mdtm" || itTransport->second == "MdtmMan")
{
const std::string localIP(
GetMdtmParameter("localIP", parameters)); // mandatory
const std::string remoteIP(
GetMdtmParameter("remoteIP", parameters)); // mandatory
const std::string prefix(GetMdtmParameter("prefix", parameters));
const int numberOfPipes =
std::stoi(GetMdtmParameter("pipes", parameters));
const std::vector<int> tolerances =
CSVToVectorInt(GetMdtmParameter("tolerances", parameters));
const std::vector<int> priorities =
CSVToVectorInt(GetMdtmParameter("priorities", parameters));
// m_Transports.push_back(std::make_shared<transport::MdtmMan>(
// localIP, remoteIP, m_AccessMode, prefix,
// numberOfPipes,
// tolerances, priorities, m_MPIComm, m_DebugMode));
}
else if (itTransport->second == "Zmq")
{
}
else
{
if (m_DebugMode == true)
throw std::invalid_argument(
"ERROR: transport + " + itTransport->second +
" not supported, in " + m_Name + m_EndMessage);
}
}
}
std::string DataManWriter::GetMdtmParameter(
const std::string parameter,
const std::map<std::string, std::string> &mdtmParameters)
{
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auto itParam = mdtmParameters.find(parameter);
if (itParam != mdtmParameters.end()) // found
{
return itParam->second; // return value
}
// if not found
// mandatory ones
if (parameter == "localIP" || parameter == "remoteIP")
{
if (m_DebugMode == true)
throw std::invalid_argument(
"ERROR: " + parameter +
" parameter not found in Method, in call to "
"DataManWriter constructor\n");
}
else if (parameter == "prefix")
{
return "";
}
else if (parameter == "pipes")
{
return "0"; // or 1?
}
else if (parameter == "tolerances") // so far empty string
{
}
else if (parameter == "priority")
{
}
return ""; // return empty string