Unverified Commit a6d9968b authored by Gaétan Lepage's avatar Gaétan Lepage Committed by GitHub
Browse files

multiqc: 1.28 -> 1.29 (#412392)

parents be4bf2d5 fd230b25

pkgs/by-name/mu/multiqc/package.nix

+12 −2
Original line number Diff line number Diff line
@@ -10,7 +10,7 @@ 


python3Packages.buildPythonApplication rec {

  pname = "multiqc";

  version = "1.28";

  version = "1.29";



  # Two data sources. One for the code, another for the test data

  srcs = [
@@ -19,7 +19,7 @@ python3Packages.buildPythonApplication rec { 
      owner = "MultiQC";

      repo = "MultiQC";

      tag = "v${version}";

      hash = "sha256-rYZaecoVAO1RE44XCw60aVwvWhKcZ/RrG3WpVRcLbuA=";

      hash = "sha256-KKLdDNf889lEbCyNpJFZoE8rNO50CRzNP4hKpKHRAcE=";

    })

    (fetchFromGitHub {

      owner = "MultiQC";
@@ -30,6 +30,15 @@ python3Packages.buildPythonApplication rec { 
    })

  ];



  # Multiqc cannot remove temporary directories in some case.

  # Default is 10 retries, lower it to 2

  postPatch = ''

    substituteInPlace multiqc/utils/util_functions.py \

      --replace-fail \

        "max_retries: int = 10," \

        "max_retries: int = 2,"

  '';



  sourceRoot = "multiqc";



  dependencies = with python3Packages; [
@@ -43,6 +52,7 @@ python3Packages.buildPythonApplication rec { 
    numpy

    packaging

    requests

    polars

    pillow

    plotly

    pyyaml