Unverified Commit 56fa2a1f authored by Arne Keller's avatar Arne Keller Committed by GitHub
Browse files

python312Packages.connected-components-3d: init at 3.22.0 (#376480)

parents 313155cc c003c7df

pkgs/development/python-modules/connected-components-3d/default.nix

0 → 100644
+61 −0
Original line number Diff line number Diff line 
{

  lib,

  buildPythonPackage,

  fetchFromGitHub,

  setuptools,

  cython,

  numpy,

  pbr,

  fastremap,

  pytestCheckHook,

  scipy,

}:



buildPythonPackage rec {

  pname = "connected-components-3d";

  version = "3.22.0";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "seung-lab";

    repo = "connected-components-3d";

    tag = version;

    hash = "sha256-txgQY9k96hFKLrKVLE6ldPdNbSnKOk2FIMrHkRQXlPk=";

  };



  build-system = [

    cython

    numpy

    pbr

    setuptools

  ];



  dependencies = [ numpy ];



  optional-dependencies = {

    stack = [

      # crackle-codec # not in nixpkgs

      fastremap

    ];

  };



  nativeCheckInputs = [

    pytestCheckHook

    scipy

  ] ++ optional-dependencies.stack;



  disabledTests = [

    # requires optional dependency crackle-codec (not in nixpkgs)

    "test_connected_components_stack"

  ];



  pythonImportsCheck = [ "cc3d" ];



  meta = {

    description = "Connected components on discrete and continuous multilabel 3D & 2D images";

    homepage = "https://github.com/seung-lab/connected-components-3d";

    changelog = "https://github.com/seung-lab/connected-components-3d/releases/tag/${version}";

    license = lib.licenses.lgpl3Plus;

    maintainers = with lib.maintainers; [ bcdarwin ];

  };

}

pkgs/development/python-modules/fastremap/default.nix

0 → 100644
+52 −0
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{

  lib,

  buildPythonPackage,

  fetchFromGitHub,

  cython,

  numpy,

  pbr,

  setuptools,

  pytestCheckHook,

}:



buildPythonPackage rec {

  pname = "fastremap";

  version = "1.15.1";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "seung-lab";

    repo = "fastremap";

    tag = version;

    hash = "sha256-naDagGD0VNRjoJ1+gkgLm3QbrnE9hD85ULz91xAfKa4=";

  };



  build-system = [

    cython

    numpy

    pbr

    setuptools

  ];



  dependencies = [

    numpy

  ];



  env.PBR_VERSION = version;



  nativeCheckInputs = [

    pytestCheckHook

  ];



  pythonImportsCheck = [

    "fastremap"

  ];



  meta = {

    description = "Remap, mask, renumber, unique, and in-place transposition of 3D labeled images and point clouds";

    homepage = "https://github.com/seung-lab/fastremap";

    changelog = "https://github.com/seung-lab/fastremap/releases/tag/${version}";

    license = lib.licenses.lgpl3Only;

    maintainers = with lib.maintainers; [ bcdarwin ];

  };

}

pkgs/top-level/python-packages.nix

+4 −0
Original line number Diff line number Diff line
@@ -2795,6 +2795,8 @@ self: super: with self; { 














  connect-box = callPackage ../development/python-modules/connect-box { };



























  connected-components-3d = callPackage ../development/python-modules/connected-components-3d { };



























  connection-pool = callPackage ../development/python-modules/connection-pool { };





























  connexion = callPackage ../development/python-modules/connexion { };










@@ -4824,6 +4826,8 @@ self: super: with self; {



























  fastprogress = callPackage ../development/python-modules/fastprogress { };



























  fastremap = callPackage ../development/python-modules/fastremap { };



























  fastrlock = callPackage ../development/python-modules/fastrlock { };





























  fasttext = callPackage ../development/python-modules/fasttext { };