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Commit 655bd9ce authored by John Chilton's avatar John Chilton
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Add install testing to Travis.

Finally includes testing against actual Galaxy master branch.
parent 95eb9cab
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......@@ -10,6 +10,7 @@ env:
- TOX_ENV=py27 SETUP=true
- TOX_ENV=py34 SETUP=true
- TOX_ENV=py34-unit SETUP=true
- TOX_ENV=py27-install-wheel
install:
- pip install tox
......
......@@ -79,6 +79,12 @@ lint-readme:
tests:
$(IN_VENV) nosetests $(NOSE_TESTS)
test-install-pypi:
bash install_test/test_install.bash
test-install-wheel: dist
PULSAR_INSTALL_TARGET=$(shell pwd)/dist/pulsar_app*.whl bash install_test/test_install.bash
coverage:
coverage run --source $(SOURCE_DIR) setup.py $(TEST_DIR)
coverage report -m
......
......@@ -2,39 +2,63 @@
set -e
echo "Start Pulsar Checks"
shopt -s nullglob
PULSAR_INSTALL_TARGET="${PULSAR_INSTALL_TARGET:-pulsar-app}"
#PULSAR_INSTALL_TARGET=`echo $PULSAR_INSTALL_TARGET` # Expand wildcards
PLANEMO_INSTALL_TARGET="${PLANEMO_INSTALL_TARGET:-planemo==0.29.1}"
echo "Begin Pulsar checks"
SCRIPT_DIR="$( cd "$(dirname "$0")" ; pwd )"
PROJECT_DIR="$SCRIPT_DIR/.."
TEMP_DIR=`mktemp -d`
echo "Setting up test directory $TEMP_DIR"
cd "$TEMP_DIR"
mkdir pulsar
cd pulsar
echo "Setting up virtualenv for Pulsar"
virtualenv venv
. venv/bin/activate # .venv\Scripts\activate if Windows
pip install pulsar-app
moo=`echo $PULSAR_INSTALL_TARGET`
echo $moo
echo "Installing Pulsar using 'pip install $PULSAR_INSTALL_TARGET'"
pip install $PULSAR_INSTALL_TARGET
echo "Running pulsar-config with default arguments"
pulsar-config
pulsar --daemon # just pulsar if Windows
echo "Starting Pulsar in daemon mode."
pulsar --daemon
echo "Waiting for Pulsar to start."
sleep 2
echo "Running a standalone Pulsar job."
pulsar-check # runs a test job
echo "Stopping Pulsar daemon."
pulsar --stop-daemon
echo "End Pulsar Checks"
echo "Testing Galaxy Interactions"
pulsar --daemon # just pulsar if Windows
echo "Testing Pulsar-Galaxy Interaction"
echo "Starting Pulsar in daemon mode."
pulsar --daemon
echo "Waiting for Pulsar to start."
sleep 2
cd ..
echo "Creating a virtual environment for Planemo to drive a test job."
virtualenv planemo-venv
. planemo-venv/bin/activate
pip install planemo
echo "Installing Pulsar using 'pip install $PLANEMO_INSTALL_TARGET'"
pip install "$PLANEMO_INSTALL_TARGET"
echo "Setting up Planemo test tools."
planemo project_init --template=demo test_tools
planemo --verbose test --job_config_file "$SCRIPT_DIR/galaxy_job_conf.xml" test_tools
pulsar --stop-daemon
echo "Ending tests.
echo "Running tool tests with Planemo through Pulsar"
planemo --verbose test --job_config_file "$SCRIPT_DIR/galaxy_job_conf.xml" test_tools/cat.xml
echo "Tests complete."
cd pulsar
. venv/bin/activate
echo "Stopping Pulsar daemon."
pulsar --stop-daemon
echo "Ending tests."
......@@ -51,3 +51,10 @@ whitelist_externals = make
deps =
-rrequirements.txt
sphinx==1.2
[testenv:py27-install-wheel]
commands = make test-install-wheel
skip_install = True
whitelist_externals = make
deps =
virtualenv
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