Commit 1d94adbc authored by Cage, Gregory's avatar Cage, Gregory
Browse files

Update gitlab ci

parent f221654d

.gitlab-ci.yml

+5 −3
Original line number Diff line number Diff line
@@ -8,6 +8,8 @@ variables: 
  GIT_STRATEGY: clone

  IMAGE_NAME: ${NDIP_DOCKER_REPOSITORY}/${CI_PROJECT_PATH}

  IMAGE_TAG: "0.1.0"

  GALAXY_URL: "https://calvera-test.ornl.gov"

  GALAXY_KEY: ${SERVICE_ACCOUNT_API_KEY}



before_script:

  - curl https://code.ornl.gov/rse-deployment/rse-sharables/raw/master/rse-bash-modules.sh -O
@@ -36,9 +38,9 @@ unit-tests: 
  stage: test

  script:

    - mkdir reports

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports ${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage run

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports ${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage report

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports ${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage xml -o reports/coverage.xml

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports -e NOVA_GALAXY_TEST_GALAXY_KEY=${GALAXY_KEY} -e NOVA_GALAXY_TEST_GALAXY_URL=${GALAXY_URL} ${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage run

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports -e NOVA_GALAXY_TEST_GALAXY_KEY=${GALAXY_KEY} -e NOVA_GALAXY_TEST_GALAXY_URL=${GALAXY_URL}${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage report

    - docker run -u `id -u`:`id -g` -v `pwd`/reports:/src/reports -e NOVA_GALAXY_TEST_GALAXY_KEY=${GALAXY_KEY} -e NOVA_GALAXY_TEST_GALAXY_URL=${GALAXY_URL}${IMAGE_NAME}:src-${CI_COMMIT_SHA} poetry run coverage xml -o reports/coverage.xml

    - sed -i "s:<source>/src:<source>${CI_BUILDS_DIR}/${CI_PROJECT_PATH}:" reports/coverage.xml



  coverage: '/TOTAL.*? (100(?:\.0+)?\%|[1-9]?\d(?:\.\d+)?\%)$/'