Commit 50b78b18 authored by Yakubov, Sergey's avatar Yakubov, Sergey
Browse files

fix example 4

parent 0b4284a7

examples/4_get_experiment_data/run_tool.py

+9 −6
Original line number Diff line number Diff line
@@ -13,13 +13,16 @@ dataset_client = galaxy.datasets.DatasetClient(galaxy_instance) 
# get active history id

history_id = galaxy_instance.histories.get_histories()[0]["id"]



tool_inputs = inputs()\

    .set("facility", "SNS")\

    .set("instrument", "ARCS")\

    .set("ipts", "28935")\

    .set("run", 243817)

tool_inputs = {

        "params|ingest_mode": "oncat",

        "params|facility": "SNS",

        "params|instrument": "ARCS",

        "params|ipts": "28935",

        "params|run": "243817",

    }



res = galaxy_instance.tools.run_tool(history_id, 'neutrons_import_oncat', tool_inputs)['outputs'][0]



res = galaxy_instance.tools.run_tool(history_id, 'neutrons_ingress_data', tool_inputs)['outputs'][0]

result_dataset_id = res['id']

dataset_client.wait_for_dataset(result_dataset_id)