Update Galaxy to the recent upstream version

Summary of Changes

Checklist

• The MR has a clear and concise title
• Code is self-documented and follows style guidelines.
• Automated tests are written and pass successfully.
• Regression tests (e.g. manually triggered system tests, manual GUI/tool tests, ...) are performed to make sure the MR does not break anything (when applicable)
• Readme file is present and up-to-date.

Documentation Updates

Additional Notes

Closes #115 (closed)

.github/workflows/maintenance_bot.yaml

@@ -8,6 +8,7 @@ jobs:
     if: github.repository_owner == 'galaxyproject'
     permissions:
       contents: read
+      issues: write
       pull-requests: write
     runs-on: ubuntu-latest
     env: