Loading lib/galaxy/jobs/runners/pulsar.py +6 −3 Original line number Diff line number Diff line Loading @@ -655,9 +655,12 @@ class PulsarJobRunner(AsynchronousJobRunner): remote_metadata_directory = run_results.get("metadata_directory", None) tool_stdout = run_results.get("stdout", "") if tool_stdout is None: try: stdout_path = Path(job_wrapper.working_directory) / "outputs" / "tool_stdout" stdout_file = open(stdout_path, "r") tool_stdout = stdout_file.read() except Exception: pass tool_stderr = run_results.get("stderr", "") job_stdout = run_results.get("job_stdout") job_stderr = run_results.get("job_stderr") Loading Loading
lib/galaxy/jobs/runners/pulsar.py +6 −3 Original line number Diff line number Diff line Loading @@ -655,9 +655,12 @@ class PulsarJobRunner(AsynchronousJobRunner): remote_metadata_directory = run_results.get("metadata_directory", None) tool_stdout = run_results.get("stdout", "") if tool_stdout is None: try: stdout_path = Path(job_wrapper.working_directory) / "outputs" / "tool_stdout" stdout_file = open(stdout_path, "r") tool_stdout = stdout_file.read() except Exception: pass tool_stderr = run_results.get("stderr", "") job_stdout = run_results.get("job_stdout") job_stderr = run_results.get("job_stderr") Loading