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Added XML for ASRP PDF refinement tool using DiffPy-CMI

McDonnell, Marshall requested to merge add-diffpy-cmi-refinement-tool into dev

Work includes:

  • added xml for ASRP Pair Distribution Function (PDF) refinement tool using the [DiffPy-CMI package

My testing:

  • Using our NDIP galaxy repo, I cloned it locally into a galaxy directory for the project
  • I used this repo and my branch to create galaxy-tools
  • In galaxy directory, I copied config/tool_conf.xml.sample to config/tool_conf.xml
  • I added the following section to the config/tool_conf.xml:
  <section id="neutrons_asrp" name="Automated Structural Refinement">
      <tool file="../../galaxy-tools/tools/neutrons/asrp_single_peak_fitting.xml"/>
      <tool file="../../galaxy-tools/tools/neutrons/asrp_pattern_matching.xml"/>
      <tool file="../../galaxy-tools/tools/neutrons/asrp_gsas2_refinement.xml"/>
      <tool file="../../galaxy-tools/tools/neutrons/asrp_diffpy_cmi_refinement.xml"/>
  </section>

NOTE: the relative path was with galaxy and galaxy-tools at the same level; the tool config file is in galaxy/config so ../../galaxy-tools is correct for that setup.

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