re #15289

in all cases call getProtonCharge to get the proton charge
re #14323

This fixes the regression test. We clear the logs off the temporary workspace, that way we don't have to do a similar thing in the loop, and we avoid copying them over each time. This is not a fully formed solution, but it's a start.

Refs #9059

Catch the exception if the contents of the run_start or start_time
properties cannot be turned into a valid DateAndTime. Turn it into the
exception for a generic failure of this method.

Takes all TimeSeriesProperty logs and clears out all entries
except the last one. Single value logs are left unchanged.

tests show that.

The Cache class was not fully threadsafe. The PARALLEL sections have
been replaced by a per-object FastMutex to ensure thread safety. Hopefully
this won't have a huge effect on performance.

+ minor modifications to logManager&Run to avoid "hiden funtcion" warnings.

into Run and LogManager

This is needed for live-data work.

Calling the getPropertyAsSingleValue from a multi-threaded loop could
cause a crash if the cache is updated without blocking.

Add tests and refactor existing code to make filtering a common free function.

Added reference returns for goniometer & its axes plus moved where
the computation of the matrix occurs.