Re #17949 Updated system test results following alg changes

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2/Mantid_tester/UserPrefFile_15_2.pref.md5

-181cdee947912603c3b77087d84691e8

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Calibration/POL_2015_2_5mm_vrod_78338_152_calfile-0.nxs.md5

-f1e3660587195e6d3523cc73ee7d4bf2

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Calibration/POL_2015_2_5mm_vrod_78338_152_calfile-1.nxs.md5

-6087091d1c7d283a81b75b3cd88f321d

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Calibration/POL_2015_2_5mm_vrod_78338_152_calfile-2.nxs.md5

-77ae05f72e0f0802f95fd2ba3fccd087

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Calibration/POL_2015_2_5mm_vrod_78338_152_calfile-3.nxs.md5

-510197d1d44fa3b279f4fc981ce703ac

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Calibration/POL_2015_2_5mm_vrod_78338_152_calfile-4.nxs.md5

-8ba462ec3983bb903fc39cc1f3a3b0b6

Testing/Data/SystemTest/POLARIS/test/Cycle_15_2_exist_v/Mantid_tester/UserPrefFile_15_2_original.pref.md5

-3fbc605d28a75a557d4e4303ffca85f5

Testing/Data/SystemTest/POLARIS/test/Cycle_16_1/Mantid_tester/UserPrefFile_16_1_si_calfile_from_all_spectra_emptysub.pref.md5

-4a9ebc458ba4da83daf75b62e67f25b9

Testing/Data/SystemTest/POLARIS/test/GrpOff/Cycle_12_2_group_masked_collimator.cal.md5

-c2fa198cf2c4a1cdf86350cafba365fe

Testing/Data/SystemTest/POLARIS/test/GrpOff/Cycle_12_2_group_masked_collimator_no_b5mod6.cal.md5

-ba22e9d51e4fb5b4615eb9704dacbd0e

Testing/Data/SystemTest/POLARIS/test/GrpOff/cycle_15_2_silicon_all_spectra.cal.md5

-a2fa4fdacf3981540787a0ccd5a6ce2c

Testing/Data/SystemTest/POLARIS/test/GrpOff/cycle_16_1_silicon_all_spectra.cal.md5

-3e6766a5dc14c34f400884027bba82b8

Testing/SystemTests/tests/analysis/ISIS_PowderOldApiCalTest.py

@@ -180,10 +180,9 @@ class LoadCalibTests(unittest.TestCase):
         vanadium_tt_35_dir = os.path.join(vanadium_base_dir, tt_35_file)
         van_tt35_data = LoadNexusProcessed(Filename=vanadium_tt_35_dir)
         self.matrix_workspaces_test(van_tt35_data, 'tt35')
-
-        self.assertAlmostEquals(-5.62564874e-06, van_tt35_data[1].readY(0)[2], places=DIFF_PLACES)
-        self.assertAlmostEquals(1.46103398e-05, van_tt35_data[5].readY(0)[4545], places=DIFF_PLACES)
-        self.assertAlmostEquals(5.19832053e-06, van_tt35_data[8].readY(0)[7553], places=DIFF_PLACES)
+        self.assertAlmostEquals(-5.59125571e-06, van_tt35_data[1].readY(0)[2], places=DIFF_PLACES)
+        self.assertAlmostEquals(1.45223820e-05, van_tt35_data[5].readY(0)[4545], places=DIFF_PLACES)
+        self.assertAlmostEquals(5.16652141e-06, van_tt35_data[8].readY(0)[7553], places=DIFF_PLACES)
         self.assertAlmostEquals(2.30071459205e-08, van_tt35_data[4].readE(0)[17], places=DIFF_PLACES)
         self.assertAlmostEquals(177.218826007, van_tt35_data[13].readX(0)[278], places=DIFF_PLACES)
 
@@ -193,9 +192,9 @@ class LoadCalibTests(unittest.TestCase):
                                            OutputWorkspace=tt_70_file)
         self.matrix_workspaces_test(van_tt70_data, 'tt70')
 
-        self.assertAlmostEquals(-1.01558339e-05, van_tt70_data[1].readY(0)[2], places=DIFF_PLACES)
-        self.assertAlmostEquals(3.05071701e-05, van_tt70_data[5].readY(0)[4545], places=DIFF_PLACES)
-        self.assertAlmostEquals(1.05314602e-05, van_tt70_data[8].readY(0)[7553], places=DIFF_PLACES)
+        self.assertAlmostEquals(-1.00937319e-05, van_tt70_data[1].readY(0)[2], places=DIFF_PLACES)
+        self.assertAlmostEquals(3.03206351e-05, van_tt70_data[5].readY(0)[4545], places=DIFF_PLACES)
+        self.assertAlmostEquals(1.04670371e-05, van_tt70_data[8].readY(0)[7553], places=DIFF_PLACES)
         self.assertAlmostEquals(3.2808780582e-08, van_tt70_data[4].readE(0)[17], places=DIFF_PLACES)
         self.assertAlmostEquals(177.218826007, van_tt70_data[13].readX(0)[278], places=DIFF_PLACES)
 
@@ -205,9 +204,9 @@ class LoadCalibTests(unittest.TestCase):
                                            OutputWorkspace=tt_88_file)
         self.matrix_workspaces_test(van_tt88_data, 'tt88')
 
-        self.assertAlmostEquals(-1.16490247e-05, van_tt88_data[1].readY(0)[2], places=DIFF_PLACES)
-        self.assertAlmostEquals(3.63947846e-05, van_tt88_data[5].readY(0)[4545], places=DIFF_PLACES)
-        self.assertAlmostEquals(1.28533968e-05, van_tt88_data[8].readY(0)[7553], places=DIFF_PLACES)
+        self.assertAlmostEquals(-1.15778020e-05, van_tt88_data[1].readY(0)[2], places=DIFF_PLACES)
+        self.assertAlmostEquals(3.61722568e-05, van_tt88_data[5].readY(0)[4545], places=DIFF_PLACES)
+        self.assertAlmostEquals(1.27747701e-05, van_tt88_data[8].readY(0)[7553], places=DIFF_PLACES)
         self.assertAlmostEquals(3.21810924e-08, van_tt88_data[4].readE(0)[17], places=DIFF_PLACES)
         self.assertAlmostEquals(177.218826007, van_tt88_data[13].readX(0)[278], places=DIFF_PLACES)
 

Testing/SystemTests/tests/analysis/ISIS_PowderOldApiTest.py

@@ -156,5 +156,5 @@ def _validate_wrapper(cls, focus_mode):
     out_name = "PEARL_routines_fmode_" + focus_mode
     mantid.LoadNexus(Filename=DIRS[0] + "PEARL/Focus_Test/DataOut/PEARL92476_92479.nxs",
                      OutputWorkspace=out_name)
-    reference_file_name = "PEARL92476_92479_" + focus_mode + ".nxs"
+    reference_file_name = "ISIS_Powder-PEARL92476_92479_" + focus_mode + ".nxs"
     return out_name, reference_file_name

Testing/SystemTests/tests/analysis/ISIS_PowderPolarisTest.py

@@ -28,7 +28,7 @@ class isis_powder_PolarisVanadiumCalTest(stresstesting.MantidStressTest):
     def cleanup(self):
         # TODO clean up reference files properly
         config['datasearch.directories'] = self.existing_config
-        _clean_up()
+        # _clean_up()
 
 
 class isis_powder_PolarisFocusTest(stresstesting.MantidStressTest):
@@ -86,7 +86,7 @@ def _calibration_validation(cls, results):
     ws_to_validate_output_name = "pearl_van_cal_output"
     mantid.LoadNexus(Filename=output_full_path, OutputWorkspace=ws_to_validate_output_name)
 
-    reference_file_name = "POLARIS_PowderDiffVanCalibration.nxs"
+    reference_file_name = "ISIS_Powder-PEARL78338_Van_Cal.nxs"
     return ws_to_validate_output_name, reference_file_name
 
 
@@ -135,4 +135,4 @@ def _get_output_dir():
 
 
 def _get_calibration_dir():
-    return os.path.join(DIRS[0], "POLARIS/test/Cycle_15_2/Calibration")
+    return os.path.join(DIRS[0], "POLARIS/Calibration")

Testing/SystemTests/tests/analysis/reference/ISIS_Powder-PEARL78338_Van_Cal.nxs.md5

+19390f1b54bb9f7837c9c4d7fe991691

Testing/SystemTests/tests/analysis/reference/ISIS_Powder-PEARL92476_92479_all.nxs.md5

+5af4d59e931792809a6c71768815827f

Testing/SystemTests/tests/analysis/reference/ISIS_Powder-PEARL92476_92479_groups.nxs.md5

+693f8b8d827cd832109d43380a366785