Squashed commit of the following:

commit fa06e946fb680f4fae6143673ab2866f2fb60e1e
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 17:23:03 2014 -0400

    Fixing this test, with the new materials stuff it got broke.

commit 0aeb857966e4021aa697443cd201c15d9bc153ee
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 16:29:44 2014 -0400

    Making the error message for having CR bank names specified in the map and not in the bank_label input.

commit c5e8cd1be84d161882f7c6199bd22e9e9e9ca867
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 16:23:55 2014 -0400

    Moving the detecting of resonance materials from Driver into the MaterialManager_Add routine.  Fixing some spacing in the edits, adding more error checking of control rods in XML.

commit f7622229ffecf18f2874e08f814f090794cd1155
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 16:22:03 2014 -0400

    Updating the benchmark 2 inputs so they won't crash with the new error checking on control rods and banks.

commit 8d0e2a8c634644828a99f7dcf8b9b25985238fde
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 13:47:29 2014 -0400

    Adding a new deferred procedure to the XSLibType_Base where it returns whether a cross section set index is resonant or not.  The subgroup library extended types use the %isXSSetReso() variable to return the logical, all others default to false.  This is done so we can move the resonant check into the MaterialManager from Driver.

commit 3c89350b76eeb0d5a69c0cbae7fd38fc140e391b
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 12:13:24 2014 -0400

    Modified the error message.

commit 619308fcc36bc161da44fe15c700569a2642d47e
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 12:07:12 2014 -0400

    Removing the deallocate in coremesh, it destroys unit tests.  Adding logic to preserve the initial mattype values for the standard input since this was breaking the verify tests and probably a lot of other standard inputs.  We now check to see if the mattype == MATTYPE_NULL, which in most XML cases is true, and those are the ones we want to change.  I can add logic later to disable fuel depletion, but I think this is sufficient for now.  Adding more checks in XML to see if the rod map and bank map have the same number of non '-' values.

commit 5b184997e1b337530ba5fa89468189e350a327e4
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Mon Jun 23 10:08:40 2014 -0400

    Adding a check for the optional depletion sublist in the MPACT block.
    Changing the logic for the routine that returns the acceptable materials
    for a given assembly to use since I added the "type" to the material name.

commit d73f57734275e3ea839e4a77ff023aa8a014502a
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Sun Jun 22 17:02:52 2014 -0400

    Fixing a few bugs.  The right string is checked for Fuel, ControlRod, and
    InsertRod in the depletion logic.  The right PL is used in
    ProcBlocks_DEPL and in XMLProc.  Commented out the artificial depletion of
    materials in the setMats routines.

commit ef830061191f5422fe314baa94a28dd61bb89bd5
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 17:02:26 2014 -0400

    Finishing up the Parameter list test. Almost there.

commit e7e5ec4f1a917e9c1e3718f1c974f763ed8eae5e
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 16:59:29 2014 -0400

    Adding some extra logic when the include and exclude lists are set.

commit c1b96db7421444b321b25d1da0df4ca9436960a6
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 16:58:49 2014 -0400

    Adding first pass at setting the depletable materials in SetupMaterials in
    Driver.

commit 178386c57bc543508ee152ff3e27264c72134757
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 16:53:25 2014 -0400

    Finished with the first pass at flagging depletable materials in the _Add
    operation.

commit d779b5ca0b47cc28e7d41510c755804affc8f4c8
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 16:09:54 2014 -0400

    Making the error messages include their bank name.  Adding an error for
    when there is a bank with no rods in it.

commit 79e8c935140a4dcfd3c31bd4ec67b59ad7ac15ef
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 20 15:40:29 2014 -0400

    Updating the default MPACT PL to have the new input parameters in the
    list.  Adding the new cards to the XMLProc and their comments to the
    manual on how to use them.

commit c9119e34387e7c700da72137002fe3bf786aab7f
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Fri Jun 13 16:17:55 2014 -0400

    Fixing a memory leak in coremesh.  Was only nullifying a pointer to
    coregeom, needed to deallocate it.  Finishing up the 1-D arrays for
    testPL.

commit 63f8a69063ddeac24dde0653fb70fcf6ee917ab0
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Thu Jun 12 14:55:39 2014 -0400

    Fixed a error message typo in PL.  Converting the testPL to use the unit
    test harness.  Finished with the scalar values.

commit a73b45f365a228af315ad90bfe6821beb0e9629e
Author: Dan Jabaay <djabaay@umich.edu>
Date:   Thu Jun 12 11:58:05 2014 -0400

    Commenting out deprecated code for AsyPinData that was on AssemblyMesh and
    AssemblyTypes.  Adding a TRIM() line in the getNextParam.