Commit 6ddfa4eb authored by Zolnierczuk, Piotr's avatar Zolnierczuk, Piotr
Browse files

mag field and cleanup

parent b9427f75

.gitignore

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@@ -3,5 +3,5 @@ 
*.pyc

*.log

*.h5

*.mac

*.mac*

.ipynb_checkpoints

misc/phasefit.py

+8 −8
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@@ -10,7 +10,7 @@ import h5py 


from functools import partial



from pysen          import NANOSECOND, OMEGA_N, MICROTM

from pysen          import NANOSECOND, OMEGA_N, MICRO

from pysen.mathutil import normalize_counts

from pysen.echo.fit import flux_weighted_eshape, gaussian_eshape, echo_fit, echo_curve

from pysen.echo.smooth_lib import smooth_phase_map_slice, smooth_phase_map_patch
@@ -78,7 +78,7 @@ def plot_fit(axes, dj, res, phase0=None, nolabels=False): 
    esig = res['esig']





    axes.errorbar(dj/MICROTM, esig[0], yerr=esig[1], fmt='.')

    axes.errorbar(dj/MICRO, esig[0], yerr=esig[1], fmt='.')

    if nolabels:

        axes.set_xticklabels([])

        axes.set_yticklabels([])
@@ -89,12 +89,12 @@ def plot_fit(axes, dj, res, phase0=None, nolabels=False): 
        amp  = res['amplitude']

        fitc = res['fitc']



        axes.plot(fitc[0]/MICROTM, fitc[1], 'r-')

        axes.plot(fitc[0]/MICRO, fitc[1], 'r-')

        if phase0 is not None:

            axes.axvline(phase0/MICROTM, lw=1,color='blue')       # phase fit

        axes.axvline((dj0[0]-dj0[1])/MICROTM, ls=':',color='red') # phase fit

        axes.axvline(dj0[0]/MICROTM, lw=1,color='red')            # phase fit

        axes.axvline((dj0[0]+dj0[1])/MICROTM, ls=':',color='red') # phase fit

            axes.axvline(phase0/MICRO, lw=1,color='blue')       # phase fit

        axes.axvline((dj0[0]-dj0[1])/MICRO, ls=':',color='red') # phase fit

        axes.axvline(dj0[0]/MICRO, lw=1,color='red')            # phase fit

        axes.axvline((dj0[0]+dj0[1])/MICRO, ls=':',color='red') # phase fit

        axes.axvline(0.0, ls='--',color='black')

        axes.axhline(ave[0],        color='green', lw=1)    # average

        axes.axhline(ave[0]-amp[0], color='green', ls='--') # average - ampl
@@ -168,7 +168,7 @@ def plot_phasemap(results): 
        if phases is not None:

            ax = axes[0][0]

            ax.set_title('phase map [uTm]')

            img = ax.imshow(phases/MICROTM, interpolation='nearest')

            img = ax.imshow(phases/MICRO, interpolation='nearest')

            #img.set_clim(0.8, 1.2)

            fig.colorbar(img, ax=ax)

scripts/pyspine.py→misc/pyspine.py

+0 −0

File moved.

View file

pysen/__init__.py

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@@ -17,7 +17,10 @@ GAMMA_N = 1.83247172e+08 #s^-1 T^-1 
# Convenience constants

ANGSTROM   = 1e-10 # Angstrom in meters

NANOSECOND = 1e-09 #

MICROTM    = 1e-06 # micro tesla-meter

GAUSS      = 1e-04 # Gauss-> Tesla

#

MICRO      = 1e-06 # mu - micro prefix





# conversion constant from field integral to phase angle

# d(phi) = OMEGA_N * d(J)

pysen/revision.py

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@@ -2,7 +2,7 @@ 
PySEN revision module

"""

import sys

__version__  = "0.7.2"

__version__  = "0.7.3"

__release__  = "dev1"

__date__     = "Feb 13, 2019"

#