Merge branch 'pztest' into dev/docker

.*.swp

# work directory (for tmp development)

work/*

tmp/*

# ========== LaTeX intermediate files

sources/plain_figures

sources/mxx

#

tests/testbase

tests/testbinh

tests/testbins

tests/testcoord

tests/testdata

tests/testdmgr

tests/testecho

tests/testeshape

tests/testfileutil

tests/testfitsutil

tests/testfits

tests/testgeom

tests/testgetopt

tests/testgtyp

tests/testhisto

tests/testioutil

tests/testlogger

tests/testmatch

tests/testmath

tests/testmems

tests/testnewcom

tests/testosutils

tests/testread

tests/teststat

tests/teststrings

tests/test[a-z]*

!tests/test[a-z]*.[Ff]90

- Intel Fortran v12.0 or newer

### GR Framework

The report command in DrSPINE uses the GR Framework (gr-framework.org).

Follow installation instructions for the C library GR.

The DrSPINE report command uses the GR Framework (gr-framework.org).

Follow installation instructions for the C version of the GR library.

###  TeX Live

In order to rebuild the documentation or use report feature in DrSPINE

one needs full TeX Live https://www.tug.org/texlive distribution.

Note: it works "out of the box" on Ubuntu (14,16,20) and MacOS with Tex Live 2016 or newer.

RedHat/CentOS 7 requires extra packages to be downloaded from the CTAN archive.

Note: it works "out of the box" on Ubuntu (14+) and MacOS with Tex Live 2016 or newer.

RedHat/CentOS 7 requires extra packages that have to be downloaded from the CTAN archive.

### Python

    cp Makefile.def.in Makefile.def

    edit Makefile.def

There are five variables that can be adjusted in the Makefile.def file or on the command line

as parameters to make command. The defaults are usually safe.

There are several variables that can be adjusted in the Makefile.def file.

The defaults are usually safe.

	# Installation top directory

	DESTDIR=$(HOME)/local

	alias nse=`source $HOME/local/bin/drspine_activate.sh`

so next time before running DrSPINE one would need to type 

so next time before running DrSPINE one would just type 

	nse

Minpack Copyright Notice (1999) University of Chicago.  All rights reserved

Redistribution and use in source and binary forms, with or

without modification, are permitted provided that the

following conditions are met:

1. Redistributions of source code must retain the above

copyright notice, this list of conditions and the following

disclaimer.

2. Redistributions in binary form must reproduce the above

copyright notice, this list of conditions and the following

disclaimer in the documentation and/or other materials

provided with the distribution.

3. The end-user documentation included with the

redistribution, if any, must include the following

acknowledgment:

   "This product includes software developed by the

   University of Chicago, as Operator of Argonne National

   Laboratory.

Alternately, this acknowledgment may appear in the software

itself, if and wherever such third-party acknowledgments

normally appear.

4. WARRANTY DISCLAIMER. THE SOFTWARE IS SUPPLIED "AS IS"

WITHOUT WARRANTY OF ANY KIND. THE COPYRIGHT HOLDER, THE

UNITED STATES, THE UNITED STATES DEPARTMENT OF ENERGY, AND

THEIR EMPLOYEES: (1) DISCLAIM ANY WARRANTIES, EXPRESS OR

IMPLIED, INCLUDING BUT NOT LIMITED TO ANY IMPLIED WARRANTIES

OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, TITLE

OR NON-INFRINGEMENT, (2) DO NOT ASSUME ANY LEGAL LIABILITY

OR RESPONSIBILITY FOR THE ACCURACY, COMPLETENESS, OR

USEFULNESS OF THE SOFTWARE, (3) DO NOT REPRESENT THAT USE OF

THE SOFTWARE WOULD NOT INFRINGE PRIVATELY OWNED RIGHTS, (4)

DO NOT WARRANT THAT THE SOFTWARE WILL FUNCTION

UNINTERRUPTED, THAT IT IS ERROR-FREE OR THAT ANY ERRORS WILL

BE CORRECTED.

5. LIMITATION OF LIABILITY. IN NO EVENT WILL THE COPYRIGHT

HOLDER, THE UNITED STATES, THE UNITED STATES DEPARTMENT OF

ENERGY, OR THEIR EMPLOYEES: BE LIABLE FOR ANY INDIRECT,

INCIDENTAL, CONSEQUENTIAL, SPECIAL OR PUNITIVE DAMAGES OF

ANY KIND OR NATURE, INCLUDING BUT NOT LIMITED TO LOSS OF

PROFITS OR LOSS OF DATA, FOR ANY REASON WHATSOEVER, WHETHER

SUCH LIABILITY IS ASSERTED ON THE BASIS OF CONTRACT, TORT

(INCLUDING NEGLIGENCE OR STRICT LIABILITY), OR OTHERWISE,

EVEN IF ANY OF SAID PARTIES HAS BEEN WARNED OF THE

POSSIBILITY OF SUCH LOSS OR DAMAGES.

# DrSPINE Makefile

export FC     =ifort

export FCFLAGS=-g

export FC     =gfortran

export FCFLAGS=-g -O3

export LDFLAGS=$(FCFLAGS)

export INSTALL=install

export MKDIR_P=mkdir -p

-include ./Makefile.def

-include ./Makefile.version

SUBDIRS=doc python sources scripts tests examples

SUBDIRS=python sources scripts tests examples doc

all:

test:	libs

	@$(MAKE) -C tests

runtest: test

runtest: bins test

	@$(MAKE) -C tests run

tarball:

	docker build -t  $(PROJECT):$(VERSION_MAJOR).$(VERSION_MINOR) .

	docker tag       $(PROJECT):$(VERSION_MAJOR).$(VERSION_MINOR) $(PROJECT):latest

.PHONY: all bins docs clean test runtest install tarball libs pylibs distclean

# (found on the stack overflow):

help:

	@LC_ALL=C $(MAKE) -pRrq -f $(firstword $(MAKEFILE_LIST)) : 2>/dev/null | awk -v RS= -F: '/(^|\n)# Files(\n|$$)/,/(^|\n)# Finished Make data base/ {if ($$1 !~ "^[#.]") {print $$1}}' | sort | grep -E -v -e '^[^[:alnum:]]' -e '^$@$$'

.PHONY: all bins docs clean distclean test runtest install tarball libs pylibs help

# DrSPINE Makefile (version information)

export PROJECT=drspine

export VERSION_MAJOR=1

export VERSION_MINOR=4

export VERSION_RELEASE=8

export VERSION_MAJOR=2

export VERSION_MINOR=0

export VERSION_RELEASE=a4

export PROJLIB=lib$(PROJECT).a

export PROJARCH=$(PROJECT)-$(VERSION_MAJOR).$(VERSION_MINOR)