Unverified Commit 8f5e01df authored by Stephan Lachnit's avatar Stephan Lachnit
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update more references

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@@ -92,7 +92,7 @@ The following notes should be taken for these fields:
    for example module READMEs, the `weight` field must be omitted so that hugo sorts them alphabetically.

For modules, additional front matter tags have to be set, as explained in the
[documentation](./usermanual/09_development/03_new_module.md#readmemd).
[documentation](./usermanual/10_development/03_new_module.md#readmemd).

## Formulae

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@@ -11,8 +11,8 @@ arising. Reports on issues, questions concerning the software as well as the doc
are very much appreciated. These should preferably be brought up on the issues tracker of the project which can be found in
the repository \[[@ap2-issue-tracker]\]. General support questions are best asked in the forum \[[@ap2-forum]\].

The FAQ in [Chapter 12](../12_faq/_index.md) is good place to start looking if a question arises.
In particular [Section 12.6](../12_faq/06_debugging.md) should be consulted before opening a bug report.
The FAQ in [Chapter 13](../13_faq/_index.md) is good place to start looking if a question arises.
In particular [Section 13.6](../13_faq/06_debugging.md) should be consulted before opening a bug report.


[@ap2-issue-tracker]: https://gitlab.cern.ch/allpix-squared/allpix-squared/issues
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@@ -12,8 +12,8 @@ on how to implement a specific feature. Getting in touch with other developers e
time on features which already exist or are currently under development by other users.

An introduction to the development of Allpix Squared and its different tools is provided in
[Chapter 9](../09_development/_index.md), including a ["How to contribute" Section](../09_development/contributing.md)
describing the steps necessary to get involved in the development. [Chapter 10](../10_devtools/_index.md) details the tools
[Chapter 10](../10_development/_index.md), including a ["How to contribute" Section](../10_development/contributing.md)
describing the steps necessary to get involved in the development. [Chapter 11](../11_devtools/_index.md) details the tools
provided with the repository which ease and facilitate contributions and ensure code quality.


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@@ -36,7 +36,7 @@ in the detectors, the carrier propagation and the conversion of the collected ch
data is finally stored on disk in ROOT TTrees or other commonly used data formats for later analysis.

After this quick start it is very much recommended to proceed to the other chapters of this user manual. For quickly
resolving common issues, the [Frequently Asked Questions](../12_faq/_index.md) may be particularly useful.
resolving common issues, the [Frequently Asked Questions](../13_faq/_index.md) may be particularly useful.


[@root]: http://root.cern.ch/
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@@ -26,7 +26,7 @@ external dependencies:
  distributions (most notably of `boost::normal_distribution`) has changed in the past, a recent version is required.

For some modules, additional dependencies exist. For details about the dependencies and their installation see
[Chapter 7](../07_modules/_index.md). The following dependencies are needed to compile the standard installation:
[Chapter 8](../08_modules/_index.md). The following dependencies are needed to compile the standard installation:

- Geant4 \[[@geant4]\]:
  Simulates the desired particles and their interactions with matter, depositing charges in the detectors with the help of
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