Commit 3dad54a8 authored by Bostelmann, Rike's avatar Bostelmann, Rike
Browse files

Remove ORNL specific PBS scripts

parent bb0fdb49

README.md

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@@ -52,7 +52,6 @@ For the core with 4 radial and 10 axial zones, perturbations of the residence ti 
│   └── power

├── _images

├── _input_preparation

├── _scripts

├── axial_slice_kp_inventory_z5

│   ├── slice-dodec-array-triso-dodec-array.csas6-shift.ce_v7.1.inp

│   ├── slice-dodec-array-triso-random.csas6-shift.ce_v7.1.inp

_scripts/run_scale7_mpi_12.pbs

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#!/bin/bash

#PBS -j oe

#PBS -ko

#PBS -V

#PBS -l nodes=1:ppn=48

#PBS -l walltime=20:00:00:00



#PBS -M bostelmannf@ornl.gov

#PBS -m ea



### start job after 5 pm

# #PBS -a 1700

# #PBS -W depend=afterok:1075506





###################################

cd $PBS_O_WORKDIR



JOB_NUM=`echo ${PBS_JOBID} | cut -d'.' -f1`

if [ $PBS_O_WORKDIR != $HOME ]

then

ln -s $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

fi



echo "JubNum: " $JOB_NUM

echo "PBSJobID: " $PBS_JOBID

echo "Current working directory `pwd`"

echo "Current Path is:"

echo $PATH

echo "Node file: $PBS_NODEFILE"

echo "------------------------"

cat $PBS_NODEFILE

echo "--------------------"

echo "Starting run at: `date`"

echo "---------------------"

PBS_NODES=$(wc -l $PBS_NODEFILE | awk '{print $1}')



##########################

# TPLs, compilers 

##########################

# module load gcc/4.8.5 cmake/3.12.1 qt/5.9.9 python/2.7.16 mpi/openmpi-1.10.7

module load mpi/openmpi-x86_64



# SCALE=/scale/release/7.0.b10/mpi

# export DATA=/scale/release/7.0.b10/mpi/data

SCALE=/scale/scale_dev/current/mpi/

export DATA=/scale/scale_dev/current/mpi/data

# export SCALE_KEEP_MICROLIB=".true."





##########################

# SCALE execution

##########################

# ${SCALE}/bin/scalerte -N $PBS_NODES -M ${PBS_NODEFILE} $PBS_JOBNAME 

${SCALE}/bin/scalerte -N 12 -M ${PBS_NODEFILE} $PBS_JOBNAME 





if [ $PBS_O_WORKDIR != $HOME ]

then

unlink $PBS_JOBNAME.o$JOB_NUM

mv $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

# rm $HOME/$PBS_JOBNAME.o$JOB_NUM 

fi

_scripts/run_scale7_mpi_24.pbs

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Original line number Diff line number Diff line 
#!/bin/bash

#PBS -j oe

#PBS -ko

#PBS -V

#PBS -l nodes=1:ppn=48

#PBS -l walltime=20:00:00:00



#PBS -M bostelmannf@ornl.gov

#PBS -m ea



### start job after 5 pm

# #PBS -a 1700

# #PBS -W depend=afterok:1075506





###################################

cd $PBS_O_WORKDIR



JOB_NUM=`echo ${PBS_JOBID} | cut -d'.' -f1`

if [ $PBS_O_WORKDIR != $HOME ]

then

ln -s $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

fi



echo "JubNum: " $JOB_NUM

echo "PBSJobID: " $PBS_JOBID

echo "Current working directory `pwd`"

echo "Current Path is:"

echo $PATH

echo "Node file: $PBS_NODEFILE"

echo "------------------------"

cat $PBS_NODEFILE

echo "--------------------"

echo "Starting run at: `date`"

echo "---------------------"

PBS_NODES=$(wc -l $PBS_NODEFILE | awk '{print $1}')



##########################

# TPLs, compilers 

##########################

# module load gcc/4.8.5 cmake/3.12.1 qt/5.9.9 python/2.7.16 mpi/openmpi-1.10.7

module load mpi/openmpi-x86_64



# SCALE=/scale/release/7.0.b10/mpi

# export DATA=/scale/release/7.0.b10/mpi/data

SCALE=/scale/scale_dev/current/mpi/

export DATA=/scale/scale_dev/current/mpi/data

# export SCALE_KEEP_MICROLIB=".true."





##########################

# SCALE execution

##########################

# ${SCALE}/bin/scalerte -N $PBS_NODES -M ${PBS_NODEFILE} $PBS_JOBNAME 

${SCALE}/bin/scalerte -N 24 -M ${PBS_NODEFILE} $PBS_JOBNAME 





if [ $PBS_O_WORKDIR != $HOME ]

then

unlink $PBS_JOBNAME.o$JOB_NUM

mv $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

# rm $HOME/$PBS_JOBNAME.o$JOB_NUM 

fi

_scripts/run_scale7_mpi_48.pbs

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Original line number Diff line number Diff line 
#!/bin/bash

#PBS -j oe

#PBS -ko

#PBS -V

#PBS -l nodes=1:ppn=48

#PBS -l walltime=20:00:00:00



#PBS -M bostelmannf@ornl.gov

#PBS -m ea



### start job after 5 pm

# #PBS -a 1700

# #PBS -W depend=afterok:1075506





###################################

cd $PBS_O_WORKDIR



JOB_NUM=`echo ${PBS_JOBID} | cut -d'.' -f1`

if [ $PBS_O_WORKDIR != $HOME ]

then

ln -s $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

fi



echo "JubNum: " $JOB_NUM

echo "PBSJobID: " $PBS_JOBID

echo "Current working directory `pwd`"

echo "Current Path is:"

echo $PATH

echo "Node file: $PBS_NODEFILE"

echo "------------------------"

cat $PBS_NODEFILE

echo "--------------------"

echo "Starting run at: `date`"

echo "---------------------"

PBS_NODES=$(wc -l $PBS_NODEFILE | awk '{print $1}')



##########################

# TPLs, compilers 

##########################

# module load gcc/4.8.5 cmake/3.12.1 qt/5.9.9 python/2.7.16 mpi/openmpi-1.10.7

module load mpi/openmpi-x86_64



# SCALE=/scale/release/7.0.b10/mpi

# export DATA=/scale/release/7.0.b10/mpi/data

SCALE=/scale/scale_dev/current/mpi/

export DATA=/scale/scale_dev/current/mpi/data

# export SCALE_KEEP_MICROLIB=".true."





##########################

# SCALE execution

##########################

# ${SCALE}/bin/scalerte -N $PBS_NODES -M ${PBS_NODEFILE} $PBS_JOBNAME 

${SCALE}/bin/scalerte -N 48 -M ${PBS_NODEFILE} $PBS_JOBNAME 





if [ $PBS_O_WORKDIR != $HOME ]

then

unlink $PBS_JOBNAME.o$JOB_NUM

mv $HOME/$PBS_JOBNAME.o$JOB_NUM $PBS_JOBNAME.o$JOB_NUM

# rm $HOME/$PBS_JOBNAME.o$JOB_NUM 

fi