Issues · Vasudevan, Rama K / pycroscopy

New issue

KMeans Clustering not writing to file

#242 · created Dec 31, 2020 by Vasudevan, Rama K
- 0
updated Dec 31, 2020
Translator issue with pyUSID update

#237 · created Aug 18, 2020 by Vasudevan, Rama K
- 0
updated Aug 18, 2020
Generic utility list

#238 · created Aug 21, 2020 by Mukherjee, Debangshu
- 0
updated Aug 21, 2020
Labview H5 Patcher

#234 · created Aug 07, 2020 by Vasudevan, Rama K
- 0
updated Aug 07, 2020
Importing nanoscope 9.4 files fails

#204 · created Apr 08, 2019 by Vasudevan, Rama K
- 5
updated May 16, 2019
Need function to get all main NSID And USID dataset

#223 · created Jun 12, 2020 by Vasudevan, Rama K
- 0
updated Jun 12, 2020
Electron microscopy translator suite

#222 · created May 15, 2020 by Vasudevan, Rama K
- 0
updated May 15, 2020
BEPS notebook only works on first measurement group

#221 · created May 15, 2020 by Vasudevan, Rama K
- 1
updated May 15, 2020
Investigate VisPy as a solution to visualization

#218 · created May 08, 2020 by Vasudevan, Rama K
- 0
updated May 08, 2020
Image shifting and saving as new dset

#219 · created May 12, 2020 by Vasudevan, Rama K enhancement
- 1
updated May 12, 2020
Separate translator(s) for DM3 and DM4 files

#206 · created May 28, 2019 by Vasudevan, Rama K enhancement
- 2
updated Jun 06, 2019
Request for interactive visualization tool for Dataset results from Process Class

#169 · created Jun 11, 2018 by Vasudevan, Rama K enhancement help wanted
- 1
updated Jun 15, 2018
Generalized Image Stack translator class

#198 · created Nov 27, 2018 by Vasudevan, Rama K
- 0
updated Nov 27, 2018
PtychographyTranslator read_dm3 issue

#196 · created Nov 20, 2018 by Vasudevan, Rama K
- 0
updated Nov 20, 2018
Rename PtychographyTranslator to something more generic

#194 · created Nov 14, 2018 by Vasudevan, Rama K
- 0
updated Nov 14, 2018
Record pycroscopy version

#195 · created Nov 15, 2018 by Vasudevan, Rama K
- 0
updated Nov 15, 2018
Implement a way to update existing data to new version requirements

#168 · created Jun 08, 2018 by Vasudevan, Rama K enhancement
- 0
updated Jun 11, 2018
loop_fitter missing checks for existing results

#167 · created Jun 04, 2018 by Vasudevan, Rama K bug enhancement
- 1
updated Jun 11, 2018
NanonisTranslator cannot translate sxm file

#160 · created May 31, 2018 by Vasudevan, Rama K
- 10
updated Jun 01, 2018
SignalFilter memory use

#130 · created Feb 12, 2018 by Vasudevan, Rama K bug
- 0
updated Apr 05, 2018
BEOdfTranslator failure

#220 · created May 15, 2020 by Vasudevan, Rama K bug
- CLOSED
- 1
updated May 15, 2020
LabViewh5Patcher fails to translate existing h5 files correctly

#210 · created Sep 20, 2019 by Vasudevan, Rama K
- CLOSED
- 1
updated Apr 24, 2020
PIFM and HyperImage Translators

#199 · created Dec 09, 2018 by Vasudevan, Rama K help wanted
- CLOSED
- 3
updated Feb 21, 2019
Loop Fitting on FORC datasets

#183 · created Jul 03, 2018 by Vasudevan, Rama K
- CLOSED
- 1
updated Jul 05, 2018
BE_Jupyter Notebook call to uiGetFile

#96 · created Jun 21, 2017 by Vasudevan, Rama K
- CLOSED
- 1
updated Jul 12, 2017
Guess/Fit functions do not find guess

#214 · created Mar 18, 2020 by Vasudevan, Rama K
- CLOSED
- 2
updated Mar 19, 2020
convert patch_be_lv_format to a translator

#98 · created Jul 12, 2017 by Vasudevan, Rama K enhancement
- CLOSED
- 0
updated Aug 18, 2017
More efficient SVD

#99 · created Jul 12, 2017 by Vasudevan, Rama K help wanted
- CLOSED
- 1
updated Jul 12, 2017
Out of date notebooks

#192 · created Oct 05, 2018 by Vasudevan, Rama K bug
- CLOSED
- 3
updated Oct 08, 2018
GTuneTranslator

#128 · created Dec 21, 2017 by Vasudevan, Rama K
- CLOSED
- 1
updated Feb 12, 2018
More elegant implementation of plot groups

#43 · created Dec 11, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 1
updated Dec 14, 2016
Window slices on mac are floats

#64 · created Feb 23, 2017 by Vasudevan, Rama K bug
- CLOSED
- 1
updated Jan 18, 2018
Better naming conventions for units in attributes

#42 · created Dec 11, 2016 by Vasudevan, Rama K bug
- CLOSED
- 1
updated Dec 13, 2016
Add success flag to datasets created by functions

#81 · created Apr 11, 2017 by Vasudevan, Rama K
- CLOSED
- 0
updated Jan 17, 2018
Fix the dendrogram plotting function

#70 · created Mar 17, 2017 by Vasudevan, Rama K bug
- CLOSED
- 0
updated Jan 19, 2018
AttributeError in gIV Notebook help wanted

#182 · created Jul 03, 2018 by Vasudevan, Rama K
- CLOSED
- 3
updated Jul 03, 2018
Image windowing should accept ascii files as well

#35 · created Dec 08, 2016 by Vasudevan, Rama K enhancement
- CLOSED
- 0
updated Dec 12, 2016
Port tree class

#31 · created Oct 25, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 0
updated Dec 09, 2016
Modular translators

#28 · created Oct 25, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 0
updated Jan 13, 2017
Complete BE SHO Guess

#24 · created Oct 25, 2016 by Vasudevan, Rama K enhancement
- CLOSED
- 0
updated Dec 06, 2016
Move Fake data generation from PySPM

#86 · created May 05, 2017 by Vasudevan, Rama K
- CLOSED
- 0
updated Aug 18, 2017
Ability to specify a list of components to reconstruct images with

#36 · created Dec 09, 2016 by Vasudevan, Rama K enhancement
- CLOSED
- 0
updated Dec 14, 2016
ImageWindowing Failures

#215 · created Mar 18, 2020 by Vasudevan, Rama K
- CLOSED
- 1
updated Apr 24, 2020
Switch from PyQt4 to PyQt5

#34 · created Dec 06, 2016 by Vasudevan, Rama K
- CLOSED
- 0
updated Dec 09, 2016
BE - take conjugates to ensure positive Q values

#30 · created Oct 25, 2016 by Vasudevan, Rama K help wanted
- CLOSED
- 0
updated Dec 15, 2016
Problem in automatically estimating window size in image windowing

#40 · created Dec 09, 2016 by Vasudevan, Rama K bug
- CLOSED
- 0
updated Dec 14, 2016
Implement Process class

#27 · created Oct 25, 2016 by Vasudevan, Rama K help wanted
- CLOSED
- 0
updated Nov 11, 2017
Generalized versions of interactive Jupyter data visualization UIs

#106 · created Jul 18, 2017 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 1
updated Apr 28, 2018
32-bit support

#85 · created May 05, 2017 by Vasudevan, Rama K
- CLOSED
- 1
updated Jan 18, 2018
Sphinx docs

#12 · created Sep 22, 2016 by Vasudevan, Rama K help wanted
- CLOSED
- 1
updated Oct 09, 2016
latest pycroscopy build (0.0a6) has the following error during import

#18 · created Oct 20, 2016 by Vasudevan, Rama K
- CLOSED
- 1
updated Dec 03, 2016
Simplify the plot_utils module

#21 · created Oct 25, 2016 by Vasudevan, Rama K help wanted
- CLOSED
- 0
updated Jan 13, 2017
Generic data visualizer

#22 · created Oct 25, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 2
updated Oct 15, 2019
New class for reading data files

#23 · created Oct 25, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 1
updated Dec 11, 2017
Better index tracking in the model class

#25 · created Oct 25, 2016 by Vasudevan, Rama K bug help wanted
- CLOSED
- 0
updated Dec 06, 2016
Implement fitting in Model

#26 · created Oct 25, 2016 by Vasudevan, Rama K help wanted
- CLOSED
- 0
updated Jan 13, 2017
Instantiate Translators with a parameter file

#29 · created Oct 25, 2016 by Vasudevan, Rama K enhancement help wanted
- CLOSED
- 0
updated Dec 13, 2016
Automate notebook tests?

#233 · created Aug 06, 2020 by Vasudevan, Rama K
- CLOSED
- 1
updated Dec 13, 2020
Igor IBW translator - loss of metadata

#207 · created Jun 13, 2019 by Vasudevan, Rama K
- CLOSED
- 4
updated Jun 24, 2019
Error during Importing pycroscopy

#205 · created May 22, 2019 by Vasudevan, Rama K
- CLOSED
- 3
updated May 24, 2019
upload con conda-forge

#134 · created Mar 19, 2018 by Vasudevan, Rama K enhancement
- CLOSED
- 10
updated Mar 29, 2018
Reshape_to_n_dims for non-square images

#157 · created May 24, 2018 by Vasudevan, Rama K bug
- CLOSED
- 1
updated May 26, 2018
svd_utils.rebuild_svd bug in create_indexed_group

#156 · created May 21, 2018 by Vasudevan, Rama K bug
- CLOSED
- 1
updated May 22, 2018
dm3 translation in python 3 results in an Assertion Error

#104 · created Jul 18, 2017 by Vasudevan, Rama K bug help wanted
- CLOSED
- 1
updated Jan 18, 2018
BE noise floor should be a 2D dataset and should come with its own spectroscopic datasets

#41 · created Dec 11, 2016 by Vasudevan, Rama K bug enhancement
- CLOSED
- 2
updated Dec 13, 2016
sdist tarball has wrong contents

#137 · created Mar 23, 2018 by Vasudevan, Rama K bug
- CLOSED
- 7
updated Mar 27, 2018
SVD error

#239 · created Dec 04, 2020 by Vasudevan, Rama K bug
- CLOSED
- 14
updated Dec 20, 2020
svd_rebuild error with get_component_slice returning ndarray

#152 · created May 03, 2018 by Vasudevan, Rama K bug
- CLOSED
- 0
updated May 08, 2018
Units and labels for data

#20 · created Oct 25, 2016 by Vasudevan, Rama K enhancement
- 1
updated Dec 14, 2016
Ability to tell a (obviously) noisy image from a relatively clear image using radially averaged correlation function

#38 · created Dec 09, 2016 by Vasudevan, Rama K enhancement
- 0
updated Dec 09, 2016
repack in ioHDF5 still crashing

#49 · created Dec 14, 2016 by Vasudevan, Rama K bug help wanted
- 0
updated Dec 14, 2016
Add the information criterion for SHO fits as well

#46 · created Dec 13, 2016 by Vasudevan, Rama K enhancement
- 0
updated Dec 14, 2016
BEPS NDF translator needs to select N random spectra for Q factor checking

#47 · created Dec 13, 2016 by Vasudevan, Rama K
- 1
updated Dec 15, 2016
Explore multi-core / faster alternatives to Kmeans and SVD

#71 · created Mar 17, 2017 by Vasudevan, Rama K enhancement
- 0
updated Mar 17, 2017
Improve analysis documentation.

#82 · created Apr 11, 2017 by Vasudevan, Rama K
- 0
updated Apr 11, 2017
Better version attributes in files

#92 · created May 24, 2017 by Vasudevan, Rama K enhancement
- 0
updated May 24, 2017
Ensure model classes accept a max_mem input

#101 · created Jul 14, 2017 by Vasudevan, Rama K
- 0
updated Jul 14, 2017
Incorrect reshaping on loop projection

#102 · created Jul 15, 2017 by Vasudevan, Rama K bug
- 1
updated Jan 18, 2018
MPI implementations for analysis and processing packages

#103 · created Jul 18, 2017 by Vasudevan, Rama K enhancement help wanted
- 0
updated Jul 18, 2017
Igor ibw translation errors in python 3

#105 · created Jul 18, 2017 by Vasudevan, Rama K bug help wanted
- 2
updated Mar 12, 2018
Colorbar in BE processing notebook

#113 · created Aug 09, 2017 by Vasudevan, Rama K
- 0
updated Aug 09, 2017
plot_loops not plotting all / plotting too many components

#115 · created Aug 18, 2017 by Vasudevan, Rama K
- CLOSED
- 1
updated Apr 28, 2018
BE Processing Notebook

#119 · created Sep 01, 2017 by Vasudevan, Rama K
- 0
updated Sep 01, 2017
BE processing Notebook

#120 · created Sep 01, 2017 by Vasudevan, Rama K
- 3
updated Sep 11, 2017
Plot attributes are hard coded

#135 · created Mar 19, 2018 by Vasudevan, Rama K bug
- 0
updated May 26, 2018
BESHOFitter does not find existing results

#136 · created Mar 19, 2018 by Vasudevan, Rama K bug
- 1
updated May 22, 2018
Add datatype information to PycroData output

#139 · created Apr 12, 2018 by Vasudevan, Rama K enhancement
- CLOSED
- 1
updated Apr 19, 2018
3+ Position support for loop visualizers

#141 · created Apr 19, 2018 by Vasudevan, Rama K enhancement
- 0
updated Apr 19, 2018
be_viz_utils.jupyter_visualize_beps_sho not working for relaxation SHO fits

#140 · created Apr 17, 2018 by Vasudevan, Rama K
- 0
updated Apr 17, 2018
utf-8 problem with NanonisFile

#163 · created May 31, 2018 by Vasudevan, Rama K
- CLOSED
- 2
updated Jun 06, 2018
Processing functions failing to find existing results

#203 · created Feb 28, 2019 by Vasudevan, Rama K
- CLOSED
- 1
updated Apr 20, 2019