pycroscopy issueshttps://code.ornl.gov/rvv/pycroscopy/-/issues2016-12-14T16:15:10Zhttps://code.ornl.gov/rvv/pycroscopy/-/issues/36Ability to specify a list of components to reconstruct images with2016-12-14T16:15:10ZVasudevan, Rama K.Ability to specify a list of components to reconstruct images with*Created by: ssomnath*
in Image windowing*Created by: ssomnath*
in Image windowinghttps://code.ornl.gov/rvv/pycroscopy/-/issues/40Problem in automatically estimating window size in image windowing2016-12-14T16:06:56ZVasudevan, Rama K.Problem in automatically estimating window size in image windowing*Created by: ssomnath*
*Created by: ssomnath*
https://code.ornl.gov/rvv/pycroscopy/-/issues/29Instantiate Translators with a parameter file 2016-12-13T23:01:25ZVasudevan, Rama K.Instantiate Translators with a parameter file *Created by: ssomnath*
This applies to the current BEPSndf, BEodf, relaxation, and GmodeLine translators
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202089889361063)
*Created by: ssomnath*
This applies to the current BEPSndf, BEodf, relaxation, and GmodeLine translators
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202089889361063)
https://code.ornl.gov/rvv/pycroscopy/-/issues/42Better naming conventions for units in attributes2016-12-13T13:07:31ZVasudevan, Rama K.Better naming conventions for units in attributes*Created by: ssomnath*
Currently attributes are named as "attribute_1_unit" for those with units and "attribute_2" for those without units. A parser looking for certain attributes would currently absorb "unit" and "2" as the units. We s...*Created by: ssomnath*
Currently attributes are named as "attribute_1_unit" for those with units and "attribute_2" for those without units. A parser looking for certain attributes would currently absorb "unit" and "2" as the units. We should be naming the attributes to something like "attribute_1__unit" or "attribute_1-unit" to avoid confusionhttps://code.ornl.gov/rvv/pycroscopy/-/issues/41BE noise floor should be a 2D dataset and should come with its own spectrosco...2016-12-13T13:05:49ZVasudevan, Rama K.BE noise floor should be a 2D dataset and should come with its own spectroscopic datasets*Created by: ssomnath*
*Created by: ssomnath*
https://code.ornl.gov/rvv/pycroscopy/-/issues/35Image windowing should accept ascii files as well2016-12-12T14:24:45ZVasudevan, Rama K.Image windowing should accept ascii files as well*Created by: ssomnath*
*Created by: ssomnath*
https://code.ornl.gov/rvv/pycroscopy/-/issues/31Port tree class2016-12-09T16:01:01ZVasudevan, Rama K.Port tree class*Created by: ssomnath*
Port the tree class from PySPM to pcroscopy
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202089936281820)
*Created by: ssomnath*
Port the tree class from PySPM to pcroscopy
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202089936281820)
https://code.ornl.gov/rvv/pycroscopy/-/issues/34Switch from PyQt4 to PyQt52016-12-09T16:00:42ZVasudevan, Rama K.Switch from PyQt4 to PyQt5*Created by: CompPhysChris*
*Created by: CompPhysChris*
https://code.ornl.gov/rvv/pycroscopy/-/issues/25Better index tracking in the model class2016-12-06T19:19:56ZVasudevan, Rama K.Better index tracking in the model class*Created by: ssomnath*
When reading a large dataset in chunks, the get_data method updates the start and end indices by itself. This would cause serious problems when fitting since the indices would have moved to the next chunk even bef...*Created by: ssomnath*
When reading a large dataset in chunks, the get_data method updates the start and end indices by itself. This would cause serious problems when fitting since the indices would have moved to the next chunk even before the get_guess method can be called. Need a better book-keeping method to keep track of indices of the current chunk
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202083147009347)
https://code.ornl.gov/rvv/pycroscopy/-/issues/24Complete BE SHO Guess2016-12-06T12:41:48ZVasudevan, Rama K.Complete BE SHO Guess*Created by: ssomnath*
Adapt the PySPM guess strategy to the same format as the ones in the guess methods. This should be trivial.
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202083147800147)
*Created by: ssomnath*
Adapt the PySPM guess strategy to the same format as the ones in the guess methods. This should be trivial.
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/202083147800147)
https://code.ornl.gov/rvv/pycroscopy/-/issues/18latest pycroscopy build (0.0a6) has the following error during import2016-12-03T08:56:50ZVasudevan, Rama K.latest pycroscopy build (0.0a6) has the following error during import*Created by: nlaanait*
/Users/nl7/anaconda2/lib/python2.7/site-packages/pycroscopy/io/hdf_utils.py in <module>()
10 from warnings import warn
11 import numpy as np
---> 12 from .microdata import MicroDataset
13
14 *...*Created by: nlaanait*
/Users/nl7/anaconda2/lib/python2.7/site-packages/pycroscopy/io/hdf_utils.py in <module>()
10 from warnings import warn
11 import numpy as np
---> 12 from .microdata import MicroDataset
13
14 **all** = ['getDataSet', 'getH5DsetRefs', 'getH5RegRefIndices', 'get_dimensionality', 'get_sort_order',
ImportError: No module named microdata
┆Issue is synchronized with this [Asana task](https://app.asana.com/0/200029249765524/200212102670085)
https://code.ornl.gov/rvv/pycroscopy/-/issues/12Sphinx docs2016-10-09T22:54:39ZVasudevan, Rama K.Sphinx docs*Created by: nlaanait*
I setup a sphinx conf.py and built the documentation (sphinx-apidoc) . I also setup a webhooks for the repo to communicate with readthedocs.io for automatic update of docs.
All of the above works. But the package ...*Created by: nlaanait*
I setup a sphinx conf.py and built the documentation (sphinx-apidoc) . I also setup a webhooks for the repo to communicate with readthedocs.io for automatic update of docs.
All of the above works. But the package structure (due to imports) needs to be updated first.
Anyway checkout the master-branch.
Help needed!