GitLab

Handling a deprecated function call in plot_map_stack. UNTESTED. Needs a more elegant solution when the function is finally removed

Removed import of the unicode_literal for all files. This will be added back only when h5py is fixed.

Importing all necessary functions to ensure python 3 compatibility for all notebooks and package files.
Note - Extensive testing is pending

* Added documentation to the jupyter notebook functions
* Moved the loops plotting functions from plot_utils to be_viz_utils

Fixed bug in how the AC Amplitude from the Spectroscopic Values was sliced in AC Mode

Corrected passing of kwargs to calls to figure, ImageGrid, and plot_map

Adds loop parameters to existing axes from plot_loop_guess_fit

Changed how the Channel group is located to allow for plotting of the rebuilt SHO results.

cmap_from_rgba generates a colormap from a simple interpolation table.
cmap_hot_desaturated now uses the above function.
make_linear_alpha_cmap generates a colormap for a single color with varying transperancy.

New parameter is a len=2 array_like multiplier for the size of the figure.  Values will be multiplied by the number of rows and columns to get the final figure size.

Set origin='lower' as default for imshow call

Added documentation for plot_cluster_h5_group and allowed it to access either of the two cluster visualization functions

Added documentation for plot_cluster_h5_group and allowed it to access either of the two cluster visualization functions

plot_loops now accepts a list of datasets containing loops and plots loops from each of these datasets for comparison from different locations.

clean up of plot_utils. PEP8 cleaning. Cleared confusion regarding the names of the clustering plotting functions

clean up of plot_utils. Removed redundant plotSpectrogram and plotBELoops functions and generalized others.

cleaned up visualizeSHOResults substantially and this method only uses plot_map_stack and plot_loops.

Simplified plotVSsnaps. This method will be removed and so will plotSpectrograms
minor PEP8 cleaining

plot_map_stack now has fewer rows and more columns wherever possible to suit common screen resolutions.
Using plot_map_stack instead of plotSHOMaps now. Latter function was redundant and therefore removed.
minor PEP8 cleaining

cleaned up visualizeSHOResults substantially and this method only uses plot_map_stack and plot_loops.

Simplified plotVSsnaps. This method will be removed and so will plotSpectrograms
minor PEP8 cleaining

plot_map_stack now has fewer rows and more columns wherever possible to suit common screen resolutions.
Using plot_map_stack instead of plotSHOMaps now. Latter function was redundant and therefore removed.
minor PEP8 cleaining