Commit 568bdf88 authored by Somnath, Suhas's avatar Somnath, Suhas
Browse files

Corrected imports to match new utils folder name

parent a62a4053
from io.translators.utils import dm4reader, parse_dm3
from io.translators.df_utils import dm4reader, parse_dm3
from . import be_hdf_utils
from . import hdf_utils
from . import io_hdf5
......
from io.translators.utils import gmode_utils, be_utils
from io.translators.df_utils import gmode_utils, be_utils
from . import be_odf
from . import be_odf_relaxation
from . import be_utils
......
......@@ -13,8 +13,8 @@ from warnings import warn
import numpy as np
from scipy.io.matlab import loadmat # To load parameters stored in Matlab .mat file
from io.translators.utils.be_utils import trimUDVS, getSpectroscopicParmLabel, parmsToDict, generatePlotGroups, createSpecVals, \
requires_conjugate, nf32
from io.translators.df_utils.be_utils import trimUDVS, getSpectroscopicParmLabel, parmsToDict, generatePlotGroups, \
createSpecVals, requires_conjugate, nf32
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, linkRefs, calc_chunks
......
......@@ -13,7 +13,7 @@ from warnings import warn
import numpy as np # For array operations
from scipy.io.matlab import loadmat # To load parameters stored in Matlab .mat file
from io.translators.utils.be_utils import trimUDVS, getSpectroscopicParmLabel, generatePlotGroups, createSpecVals, nf32
from io.translators.df_utils.be_utils import trimUDVS, getSpectroscopicParmLabel, generatePlotGroups, createSpecVals, nf32
from .translator import Translator # Because this class extends the abstract Translator class
from .utils import make_position_mat, get_position_slicing, generate_dummy_main_parms
from ..be_hdf_utils import maxReadPixels
......
......@@ -15,7 +15,7 @@ import numpy as np
import xlrd as xlreader # To read the UDVS spreadsheet
from scipy.io.matlab import loadmat # To load parameters stored in Matlab .mat file
from io.translators.utils.be_utils import trimUDVS, getSpectroscopicParmLabel, parmsToDict, generatePlotGroups, normalizeBEresponse, \
from io.translators.df_utils.be_utils import trimUDVS, getSpectroscopicParmLabel, parmsToDict, generatePlotGroups, normalizeBEresponse, \
createSpecVals, nf32
from .translator import Translator
from .utils import make_position_mat, generate_dummy_main_parms
......
......@@ -15,7 +15,7 @@ from __future__ import division, print_function, absolute_import
import numpy as np
from io.translators.utils.parse_dm3 import *
from io.translators.df_utils.parse_dm3 import *
structarray_to_np_map = {
('d', 'd'): np.complex128,
......
......@@ -12,8 +12,8 @@ import os
import numpy as np
from skimage.io import imread
from io.translators.utils import dm4reader
from io.translators.utils.dm3_image_utils import parse_dm_header, imagedatadict_to_ndarray
from io.translators.df_utils import dm4reader
from io.translators.df_utils.dm3_image_utils import parse_dm_header, imagedatadict_to_ndarray
def read_image(image_path, *args, **kwargs):
......
......@@ -13,10 +13,8 @@ import numpy as np # For array operations
from scipy.io import loadmat
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, linkRefs
from ..io_hdf5 import ioHDF5 # Now the translator is responsible for writing the data.
from ..microdata import MicroDataGroup, MicroDataset # building blocks for defining hierarchical storage in the H5 file
from .utils import build_ind_val_dsets
from ..microdata import MicroDataset # building blocks for defining hierarchical storage in the H5 file
class ForcIVTranslator(Translator):
......@@ -93,7 +91,6 @@ class ForcIVTranslator(Translator):
[ds_pos_ind, ds_pos_val, ds_spec_inds, ds_spec_vals],
parm_dict)
def _read_parms(self, raw_data_file_handle):
"""
Copies experimental parameters from the .mat file to a dictionary
......
......@@ -12,7 +12,7 @@ from os import path, remove # File Path formatting
import numpy as np # For array operations
from scipy.io.matlab import loadmat # To load parameters stored in Matlab .mat file
from io.translators.utils.gmode_utils import readGmodeParms
from io.translators.df_utils.gmode_utils import readGmodeParms
from .translator import Translator # Because this class extends the abstract Translator class
from .utils import make_position_mat, get_position_slicing, generate_dummy_main_parms
from ..hdf_utils import getH5DsetRefs, linkRefs
......
......@@ -12,7 +12,7 @@ from warnings import warn
import numpy as np
from scipy.io.matlab import loadmat # To load parameters stored in Matlab .mat file
from io.translators.utils.be_utils import parmsToDict
from io.translators.df_utils.be_utils import parmsToDict
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, linkRefs
......
......@@ -11,7 +11,7 @@ import os
import numpy as np
from skimage.measure import block_reduce
from io.translators.utils.io_image import read_image
from io.translators.df_utils.io_image import read_image
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, calc_chunks, link_as_main, findDataset
......
......@@ -15,7 +15,7 @@ import numpy as np
from skimage.measure import block_reduce
from skimage.util import crop
from io.translators.utils.io_image import unnest_parm_dicts, read_dm3
from io.translators.df_utils.io_image import unnest_parm_dicts, read_dm3
from .translator import Translator
from .utils import generate_dummy_main_parms, make_position_mat, get_spectral_slicing, \
get_position_slicing, build_ind_val_dsets
......
......@@ -13,8 +13,8 @@ import numpy as np
from skimage.measure import block_reduce
from skimage.util import crop
from io.translators.utils import dm4reader
from io.translators.utils.io_image import read_image, read_dm3, parse_dm4_parms
from io.translators.df_utils import dm4reader
from io.translators.df_utils.io_image import read_image, read_dm3, parse_dm4_parms
from .translator import Translator
from .utils import generate_dummy_main_parms, make_position_mat, get_spectral_slicing, \
get_position_slicing, build_ind_val_dsets
......
......@@ -12,7 +12,7 @@ import numpy as np
from skimage.data import imread
from skimage.measure import block_reduce
from io.translators.utils.io_image import read_image, read_dm3
from io.translators.df_utils.io_image import read_image, read_dm3
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, calc_chunks, link_as_main
......
......@@ -11,7 +11,7 @@ import os
import numpy as np
from skimage.measure import block_reduce
from io.translators.utils.io_image import read_image, read_dm3
from io.translators.df_utils.io_image import read_image, read_dm3
from .translator import Translator
from .utils import generate_dummy_main_parms, build_ind_val_dsets
from ..hdf_utils import getH5DsetRefs, calc_chunks, link_as_main
......
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