Commit 4ba93abc authored by Unknown's avatar Unknown
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Merge remote-tracking branch 'origin/master'

parents 6ae4e73c 32703b3a
......@@ -8,7 +8,7 @@ pycroscopy |statusimage|
What is pycroscopy?
-------------------
pycroscopy is a `python <http://www.python.org/>`_ package for image processing and scientific analysis of imaging modalities such as multi-frequency scanning probe microscopy, scanning tunneling spectroscopy, x-ray diffraction microscopy, and transmission electron microscopy. pycroscopy uses a data-centric model wherein the raw data collected from the microscope, results fron analysis and processing routines are all written to standardized heirarchical data format (HDF5) files for traceability, reproducability, and prevenance.
pycroscopy is a `python <http://www.python.org/>`_ package for image processing and scientific analysis of imaging modalities such as multi-frequency scanning probe microscopy, scanning tunneling spectroscopy, x-ray diffraction microscopy, and transmission electron microscopy. pycroscopy uses a data-centric model wherein the raw data collected from the microscope, results from analysis and processing routines are all written to standardized hierarchical data format (HDF5) files for traceability, reproducibility, and provenance.
With `pycroscopy <https://pycroscopy.github.io/pycroscopy/>`_ we aim to:
1. Serve as a hub for collaboration across scientific domains (microscopists, material scientists, biologists...)
......@@ -87,9 +87,13 @@ Journal Papers using pycroscopy
 
4. `Direct Imaging of the Relaxation of Individual Ferroelectric Interfaces in a Tensile-Strained Film <http://onlinelibrary.wiley.com/doi/10.1002/aelm.201600508/full>`_ by L. Li et al.; Advanced Electronic Materials (2017), jupyter notebook `here 4 <http://nbviewer.jupyter.org/github/pycroscopy/pycroscopy/blob/master/jupyter_notebooks/BE_Processing.ipynb>`_
5. Feature extraction via similarity search: application to atom finding and denosing in electon and scanning probe microscopy imaging by S. Somnath et al.; under review at Advanced Structural and Chemical Imaging (2017), jupyter notebook `here 5 <http://nbviewer.jupyter.org/github/pycroscopy/pycroscopy/blob/master/jupyter_notebooks/Image_Cleaning_Atom_Finding.ipynb>`_
5. Ultrafast Current Imaging via Bayesian Inference by S. Somnath et al., accepted at Nature Communications (2017).
6. Many more coming soon....
6. Decoding apparent ferroelectricity in perovskite nanofibers by R. Ganeshkumar et al., accepted at ACS Applied Materials & Interfaces (2017).
7. Feature extraction via similarity search: application to atom finding and denosing in electon and scanning probe microscopy imaging by S. Somnath et al.; under review at Advanced Structural and Chemical Imaging (2017), jupyter notebook `here 5 <http://nbviewer.jupyter.org/github/pycroscopy/pycroscopy/blob/master/jupyter_notebooks/Image_Cleaning_Atom_Finding.ipynb>`_
8. Many more coming soon....
International conferences and workshops using pycroscopy
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......@@ -48,9 +48,6 @@ import os
# multivariate analysis:
from sklearn.cluster import KMeans
from sklearn.decomposition import NMF
from pysptools import eea
import pysptools.abundance_maps as amp
from pysptools.eea import nfindr
# finally import pycroscopy:
import pycroscopy as px
......
version = '0.59.0'
date = '11/13/2017'
time = '8:41:27'
version = '0.59.1'
date = '11/20/2017'
time = '11:30:27'
......@@ -30,7 +30,7 @@ else:
setup(
name='pycroscopy',
version='0.59.0',
version='0.59.1',
description='A suite of Python libraries for high performance scientific computing of microscopy data.',
long_description=long_description,
classifiers=[
......
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