diff --git a/docs/conf.py b/docs/conf.py
index 4550df4276d9797f1d26b6640f4d0b90ac1ee9e1..e934df3dc0d741a1e4964d1cca9a202dd5aed2bf 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -113,7 +113,7 @@ todo_include_todos = True
 
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
-#html_theme = 'default'
+html_theme = 'default'
 
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
diff --git a/docs/modules.rst b/docs/modules.rst
index ddc50d6d55e8fc388caeb5441fc483e77e0e025f..b1daa22047eca90395dc2ca6aacbbd30025a2a79 100644
--- a/docs/modules.rst
+++ b/docs/modules.rst
@@ -4,7 +4,5 @@ pycroscopy
 .. toctree::
    :maxdepth: 4
 
-   io
-   analysis
-   processing
-   viz
+   pycroscopy
+   setup