/* * Distributed under the OSI-approved Apache License, Version 2.0. See * accompanying file Copyright.txt for details. */ #include <cstdint> #include <cstring> #include <iostream> #include <stdexcept> #include <adios2.h> #include <adios_read.h> #include <gtest/gtest.h> #include "../SmallTestData.h" class BPWriteReadTest : public ::testing::Test { public: BPWriteReadTest() = default; SmallTestData m_TestData; }; //****************************************************************************** // 1D 1x8 test data //****************************************************************************** // ADIOS2 write, native ADIOS1 read TEST_F(BPWriteReadTest, ADIOS2BPWriteADIOS1Read1D8stdio) { std::string fname = "ADIOS2BPWriteADIOS1Read1D8stdio.bp"; // Write test data using ADIOS2 { adios2::ADIOS adios(true); adios2::IO &io = adios.DeclareIO("TestIO"); // Declare 1D variables { auto &var_i8 = io.DefineVariable<char>("i8", {}, {}, adios2::Dims{8}); auto &var_i16 = io.DefineVariable<short>("i16", {}, {}, adios2::Dims{8}); auto &var_i32 = io.DefineVariable<int>("i32", {}, {}, adios2::Dims{8}); auto &var_i64 = io.DefineVariable<long>("i64", {}, {}, adios2::Dims{8}); auto &var_u8 = io.DefineVariable<unsigned char>("u8", {}, {}, adios2::Dims{8}); auto &var_u16 = io.DefineVariable<unsigned short>("u16", {}, {}, adios2::Dims{8}); auto &var_u32 = io.DefineVariable<unsigned int>("u32", {}, {}, adios2::Dims{8}); auto &var_u64 = io.DefineVariable<unsigned long>("u64", {}, {}, adios2::Dims{8}); auto &var_r32 = io.DefineVariable<float>("r32", {}, {}, adios2::Dims{8}); auto &var_r64 = io.DefineVariable<double>("r64", {}, {}, adios2::Dims{8}); } // Create the BP Engine io.SetEngine("BPFileWriter"); io.AddTransport("File", {{"Library", "stdio"}}); auto engine = io.Open(fname, adios2::OpenMode::Write); ASSERT_NE(engine.get(), nullptr); for (size_t step = 0; step < 3; ++step) { // Retrieve the variables that previously went out of scope auto &var_i8 = io.GetVariable<char>("i8"); auto &var_i16 = io.GetVariable<short>("i16"); auto &var_i32 = io.GetVariable<int>("i32"); auto &var_i64 = io.GetVariable<long>("i64"); auto &var_u8 = io.GetVariable<unsigned char>("u8"); auto &var_u16 = io.GetVariable<unsigned short>("u16"); auto &var_u32 = io.GetVariable<unsigned int>("u32"); auto &var_u64 = io.GetVariable<unsigned long>("u64"); auto &var_r32 = io.GetVariable<float>("r32"); auto &var_r64 = io.GetVariable<double>("r64"); // Write each one engine->Write(var_i8, m_TestData.I8.data() + step); engine->Write(var_i16, m_TestData.I16.data() + step); engine->Write(var_i32, m_TestData.I32.data() + step); engine->Write(var_i64, m_TestData.I64.data() + step); engine->Write(var_u8, m_TestData.U8.data() + step); engine->Write(var_u16, m_TestData.U16.data() + step); engine->Write(var_u32, m_TestData.U32.data() + step); engine->Write(var_u64, m_TestData.U64.data() + step); engine->Write(var_r32, m_TestData.R32.data() + step); engine->Write(var_r64, m_TestData.R64.data() + step); // Advance to the next time step engine->Advance(); } // Close the file engine->Close(); } // Read test data using ADIOS1 #ifdef ADIOS2_HAVE_MPI // Read everything from rank 0 int rank; MPI_Comm_rank(); if (rank == 0) #endif { adios_read_init_method(ADIOS_READ_METHOD_BP, MPI_COMM_WORLD, "verbose=3"); // Open the file for reading ADIOS_FILE *f = adios_read_open_file((fname + ".dir/" + fname + ".0").c_str(), ADIOS_READ_METHOD_BP, MPI_COMM_WORLD); ASSERT_NE(f, nullptr); // Check the variables exist ADIOS_VARINFO *var_i8 = adios_inq_var(f, "i8"); ASSERT_NE(var_i8, nullptr); ASSERT_EQ(var_i8->ndim, 1); ASSERT_EQ(var_i8->dims[0], 8); ADIOS_VARINFO *var_i16 = adios_inq_var(f, "i16"); ASSERT_NE(var_i16, nullptr); ASSERT_EQ(var_i16->ndim, 1); ASSERT_EQ(var_i16->dims[0], 8); ADIOS_VARINFO *var_i32 = adios_inq_var(f, "i32"); ASSERT_NE(var_i32, nullptr); ASSERT_EQ(var_i32->ndim, 1); ASSERT_EQ(var_i32->dims[0], 8); ADIOS_VARINFO *var_i64 = adios_inq_var(f, "i64"); ASSERT_NE(var_i64, nullptr); ASSERT_EQ(var_i64->ndim, 1); ASSERT_EQ(var_i64->dims[0], 8); ADIOS_VARINFO *var_u8 = adios_inq_var(f, "u8"); ASSERT_NE(var_u8, nullptr); ASSERT_EQ(var_u8->ndim, 1); ASSERT_EQ(var_u8->dims[0], 8); ADIOS_VARINFO *var_u16 = adios_inq_var(f, "u16"); ASSERT_NE(var_u16, nullptr); ASSERT_EQ(var_u16->ndim, 1); ASSERT_EQ(var_u16->dims[0], 8); ADIOS_VARINFO *var_u32 = adios_inq_var(f, "u32"); ASSERT_NE(var_u32, nullptr); ASSERT_EQ(var_u32->ndim, 1); ASSERT_EQ(var_u32->dims[0], 8); ADIOS_VARINFO *var_u64 = adios_inq_var(f, "u64"); ASSERT_NE(var_u64, nullptr); ASSERT_EQ(var_u64->ndim, 1); ASSERT_EQ(var_u64->dims[0], 8); ADIOS_VARINFO *var_r32 = adios_inq_var(f, "r32"); ASSERT_NE(var_r32, nullptr); ASSERT_EQ(var_r32->ndim, 1); ASSERT_EQ(var_r32->dims[0], 8); ADIOS_VARINFO *var_r64 = adios_inq_var(f, "r64"); ASSERT_NE(var_r64, nullptr); ASSERT_EQ(var_r64->ndim, 1); ASSERT_EQ(var_r64->dims[0], 8); std::array<char, 8> I8; std::array<int16_t, 8> I16; std::array<int32_t, 8> I32; std::array<int64_t, 8> I64; std::array<unsigned char, 8> U8; std::array<uint16_t, 8> U16; std::array<uint32_t, 8> U32; std::array<uint64_t, 8> U64; std::array<float, 8> R32; std::array<double, 8> R64; uint64_t start[1] = {0}; uint64_t count[1] = {8}; ADIOS_SELECTION *sel = adios_selection_boundingbox(1, start, count); // Read stuff for (size_t t = 0; t < 3; ++t) { // Read the current step adios_schedule_read_byid(f, sel, var_i8->varid, t, 1, I8.data()); adios_schedule_read_byid(f, sel, var_i16->varid, t, 1, I16.data()); adios_schedule_read_byid(f, sel, var_i32->varid, t, 1, I32.data()); adios_schedule_read_byid(f, sel, var_i64->varid, t, 1, I64.data()); adios_schedule_read_byid(f, sel, var_u8->varid, t, 1, U8.data()); adios_schedule_read_byid(f, sel, var_u16->varid, t, 1, U16.data()); adios_schedule_read_byid(f, sel, var_u32->varid, t, 1, U32.data()); adios_schedule_read_byid(f, sel, var_u64->varid, t, 1, U64.data()); adios_schedule_read_byid(f, sel, var_r32->varid, t, 1, R32.data()); adios_schedule_read_byid(f, sel, var_r64->varid, t, 1, R64.data()); adios_perform_reads(f, 1); // Check if it's correct for (size_t i = 0; i < 8; ++i) { std::stringstream ss; ss << "t=" << t << " i=" << i; std::string msg = ss.str(); EXPECT_EQ(I8[i], m_TestData.I8[i + t]) << msg; EXPECT_EQ(I16[i], m_TestData.I16[i + t]) << msg; EXPECT_EQ(I32[i], m_TestData.I32[i + t]) << msg; EXPECT_EQ(I64[i], m_TestData.I64[i + t]) << msg; EXPECT_EQ(U8[i], m_TestData.U8[i + t]) << msg; EXPECT_EQ(U16[i], m_TestData.U16[i + t]) << msg; EXPECT_EQ(U32[i], m_TestData.U32[i + t]) << msg; EXPECT_EQ(U64[i], m_TestData.U64[i + t]) << msg; EXPECT_EQ(R32[i], m_TestData.R32[i + t]) << msg; EXPECT_EQ(R64[i], m_TestData.R64[i + t]) << msg; } } adios_selection_delete(sel); // Cleanup variable structures adios_free_varinfo(var_i8); adios_free_varinfo(var_i16); adios_free_varinfo(var_i32); adios_free_varinfo(var_i64); adios_free_varinfo(var_u8); adios_free_varinfo(var_u16); adios_free_varinfo(var_u32); adios_free_varinfo(var_u64); adios_free_varinfo(var_r32); adios_free_varinfo(var_r64); // Cleanup file adios_read_close(f); } } // ADIOS2 write, ADIOS2 read TEST_F(BPWriteReadTest, DISABLED_ADIOS2BPWriteADIOS2BPRead1D8stdio) { std::string fname = "ADIOS2BPWriteADIOS2BPRead1D8stdio.bp"; ASSERT_TRUE(false) << "ADIOS2 read API is not yet implemented"; } //****************************************************************************** // 2D 2x4 test data //****************************************************************************** // ADIOS2 write, native ADIOS1 read TEST_F(BPWriteReadTest, ADIOS2BPWriteADIOS1Read2D2x4stdio) { std::string fname = "ADIOS2BPWriteADIOS1Read2D2x4Teststdio.bp"; // Write test data using ADIOS2 { adios2::ADIOS adios(true); adios2::IO &io = adios.DeclareIO("TestIO"); // Declare 1D variables { auto &var_i8 = io.DefineVariable<char>("i8", {}, {}, adios2::Dims{2, 4}); auto &var_i16 = io.DefineVariable<short>("i16", {}, {}, adios2::Dims{2, 4}); auto &var_i32 = io.DefineVariable<int>("i32", {}, {}, adios2::Dims{2, 4}); auto &var_i64 = io.DefineVariable<long>("i64", {}, {}, adios2::Dims{2, 4}); auto &var_u8 = io.DefineVariable<unsigned char>("u8", {}, {}, adios2::Dims{2, 4}); auto &var_u16 = io.DefineVariable<unsigned short>( "u16", {}, {}, adios2::Dims{2, 4}); auto &var_u32 = io.DefineVariable<unsigned int>("u32", {}, {}, adios2::Dims{2, 4}); auto &var_u64 = io.DefineVariable<unsigned long>( "u64", {}, {}, adios2::Dims{2, 4}); auto &var_r32 = io.DefineVariable<float>("r32", {}, {}, adios2::Dims{2, 4}); auto &var_r64 = io.DefineVariable<double>("r64", {}, {}, adios2::Dims{2, 4}); } // Create the BP Engine io.SetEngine("BPFileWriter"); io.AddTransport("file", {{"Library", "stdio"}}); auto engine = io.Open(fname, adios2::OpenMode::Write); ASSERT_NE(engine.get(), nullptr); for (size_t step = 0; step < 3; ++step) { // Retrieve the variables that previously went out of scope auto &var_i8 = io.GetVariable<char>("i8"); auto &var_i16 = io.GetVariable<short>("i16"); auto &var_i32 = io.GetVariable<int>("i32"); auto &var_i64 = io.GetVariable<long>("i64"); auto &var_u8 = io.GetVariable<unsigned char>("u8"); auto &var_u16 = io.GetVariable<unsigned short>("u16"); auto &var_u32 = io.GetVariable<unsigned int>("u32"); auto &var_u64 = io.GetVariable<unsigned long>("u64"); auto &var_r32 = io.GetVariable<float>("r32"); auto &var_r64 = io.GetVariable<double>("r64"); // Write each one engine->Write(var_i8, m_TestData.I8.data() + step); engine->Write(var_i16, m_TestData.I16.data() + step); engine->Write(var_i32, m_TestData.I32.data() + step); engine->Write(var_i64, m_TestData.I64.data() + step); engine->Write(var_u8, m_TestData.U8.data() + step); engine->Write(var_u16, m_TestData.U16.data() + step); engine->Write(var_u32, m_TestData.U32.data() + step); engine->Write(var_u64, m_TestData.U64.data() + step); engine->Write(var_r32, m_TestData.R32.data() + step); engine->Write(var_r64, m_TestData.R64.data() + step); // Advance to the next time step engine->Advance(); } // Close the file engine->Close(); } // Read test data using ADIOS1 #ifdef ADIOS2_HAVE_MPI // Read everything from rank 0 int rank; MPI_Comm_rank(); if (rank == 0) #endif { adios_read_init_method(ADIOS_READ_METHOD_BP, MPI_COMM_WORLD, "verbose=3"); // Open the file for reading ADIOS_FILE *f = adios_read_open_file((fname + ".dir/" + fname + ".0").c_str(), ADIOS_READ_METHOD_BP, MPI_COMM_WORLD); ASSERT_NE(f, nullptr); // Check the variables exist ADIOS_VARINFO *var_i8 = adios_inq_var(f, "i8"); ASSERT_NE(var_i8, nullptr); ASSERT_EQ(var_i8->ndim, 2); ASSERT_EQ(var_i8->dims[0], 2); ASSERT_EQ(var_i8->dims[1], 4); ADIOS_VARINFO *var_i16 = adios_inq_var(f, "i16"); ASSERT_NE(var_i16, nullptr); ASSERT_EQ(var_i16->ndim, 2); ASSERT_EQ(var_i16->dims[0], 2); ASSERT_EQ(var_i16->dims[1], 4); ADIOS_VARINFO *var_i32 = adios_inq_var(f, "i32"); ASSERT_NE(var_i32, nullptr); ASSERT_EQ(var_i32->ndim, 2); ASSERT_EQ(var_i32->dims[0], 2); ASSERT_EQ(var_i32->dims[1], 4); ADIOS_VARINFO *var_i64 = adios_inq_var(f, "i64"); ASSERT_NE(var_i64, nullptr); ASSERT_EQ(var_i64->ndim, 2); ASSERT_EQ(var_i64->dims[0], 2); ASSERT_EQ(var_i64->dims[1], 4); ADIOS_VARINFO *var_u8 = adios_inq_var(f, "u8"); ASSERT_NE(var_u8, nullptr); ASSERT_EQ(var_u8->ndim, 2); ASSERT_EQ(var_u8->dims[0], 2); ASSERT_EQ(var_u8->dims[1], 4); ADIOS_VARINFO *var_u16 = adios_inq_var(f, "u16"); ASSERT_NE(var_u16, nullptr); ASSERT_EQ(var_u16->ndim, 2); ASSERT_EQ(var_u16->dims[0], 2); ASSERT_EQ(var_u16->dims[1], 4); ADIOS_VARINFO *var_u32 = adios_inq_var(f, "u32"); ASSERT_NE(var_u32, nullptr); ASSERT_EQ(var_u32->ndim, 2); ASSERT_EQ(var_u32->dims[0], 2); ASSERT_EQ(var_u32->dims[1], 4); ADIOS_VARINFO *var_u64 = adios_inq_var(f, "u64"); ASSERT_NE(var_u64, nullptr); ASSERT_EQ(var_u64->ndim, 2); ASSERT_EQ(var_u64->dims[0], 2); ASSERT_EQ(var_u64->dims[1], 4); ADIOS_VARINFO *var_r32 = adios_inq_var(f, "r32"); ASSERT_NE(var_r32, nullptr); ASSERT_EQ(var_r32->ndim, 2); ASSERT_EQ(var_r32->dims[0], 2); ASSERT_EQ(var_r32->dims[1], 4); ADIOS_VARINFO *var_r64 = adios_inq_var(f, "r64"); ASSERT_NE(var_r64, nullptr); ASSERT_EQ(var_r64->ndim, 2); ASSERT_EQ(var_r64->dims[0], 2); ASSERT_EQ(var_r64->dims[1], 4); std::array<char, 8> I8; std::array<int16_t, 8> I16; std::array<int32_t, 8> I32; std::array<int64_t, 8> I64; std::array<unsigned char, 8> U8; std::array<uint16_t, 8> U16; std::array<uint32_t, 8> U32; std::array<uint64_t, 8> U64; std::array<float, 8> R32; std::array<double, 8> R64; uint64_t start[2] = {0, 0}; uint64_t count[2] = {2, 4}; ADIOS_SELECTION *sel = adios_selection_boundingbox(2, start, count); // Read stuff for (size_t t = 0; t < 3; ++t) { // Read the current step adios_schedule_read_byid(f, sel, var_i8->varid, t, 1, I8.data()); adios_schedule_read_byid(f, sel, var_i16->varid, t, 1, I16.data()); adios_schedule_read_byid(f, sel, var_i32->varid, t, 1, I32.data()); adios_schedule_read_byid(f, sel, var_i64->varid, t, 1, I64.data()); adios_schedule_read_byid(f, sel, var_u8->varid, t, 1, U8.data()); adios_schedule_read_byid(f, sel, var_u16->varid, t, 1, U16.data()); adios_schedule_read_byid(f, sel, var_u32->varid, t, 1, U32.data()); adios_schedule_read_byid(f, sel, var_u64->varid, t, 1, U64.data()); adios_schedule_read_byid(f, sel, var_r32->varid, t, 1, R32.data()); adios_schedule_read_byid(f, sel, var_r64->varid, t, 1, R64.data()); adios_perform_reads(f, 1); // Check if it's correct for (size_t i = 0; i < 8; ++i) { std::stringstream ss; ss << "t=" << t << " i=" << i; std::string msg = ss.str(); EXPECT_EQ(I8[i], m_TestData.I8[i + t]) << msg; EXPECT_EQ(I16[i], m_TestData.I16[i + t]) << msg; EXPECT_EQ(I32[i], m_TestData.I32[i + t]) << msg; EXPECT_EQ(I64[i], m_TestData.I64[i + t]) << msg; EXPECT_EQ(U8[i], m_TestData.U8[i + t]) << msg; EXPECT_EQ(U16[i], m_TestData.U16[i + t]) << msg; EXPECT_EQ(U32[i], m_TestData.U32[i + t]) << msg; EXPECT_EQ(U64[i], m_TestData.U64[i + t]) << msg; EXPECT_EQ(R32[i], m_TestData.R32[i + t]) << msg; EXPECT_EQ(R64[i], m_TestData.R64[i + t]) << msg; } } adios_selection_delete(sel); // Cleanup variable structures adios_free_varinfo(var_i8); adios_free_varinfo(var_i16); adios_free_varinfo(var_i32); adios_free_varinfo(var_i64); adios_free_varinfo(var_u8); adios_free_varinfo(var_u16); adios_free_varinfo(var_u32); adios_free_varinfo(var_u64); adios_free_varinfo(var_r32); adios_free_varinfo(var_r64); // Cleanup file adios_read_close(f); } } // ADIOS2 write, ADIOS2 read TEST_F(BPWriteReadTest, DISABLED_ADIOS2BPWriteADIOS2BPRead2D2x4stdio) { std::string fname = "ADIOS2BPWriteADIOS2BPRead2D2x4Teststdio.bp"; ASSERT_TRUE(false) << "ADIOS2 read API is not yet implemented"; } //****************************************************************************** // 2D 4x2 test data //****************************************************************************** // ADIOS2 write, native ADIOS1 read TEST_F(BPWriteReadTest, ADIOS2BPWriteADIOS1Read2D4x2stdio) { std::string fname = "ADIOS2BPWriteADIOS1Read2D4x2Teststdio.bp"; // Write test data using ADIOS2 { adios2::ADIOS adios(true); adios2::IO &io = adios.DeclareIO("TestIO"); // Declare 1D variables { auto &var_i8 = io.DefineVariable<char>("i8", {}, {}, adios2::Dims{4, 2}); auto &var_i16 = io.DefineVariable<short>("i16", {}, {}, adios2::Dims{4, 2}); auto &var_i32 = io.DefineVariable<int>("i32", {}, {}, adios2::Dims{4, 2}); auto &var_i64 = io.DefineVariable<long>("i64", {}, {}, adios2::Dims{4, 2}); auto &var_u8 = io.DefineVariable<unsigned char>("u8", {}, {}, adios2::Dims{4, 2}); auto &var_u16 = io.DefineVariable<unsigned short>( "u16", {}, {}, adios2::Dims{4, 2}); auto &var_u32 = io.DefineVariable<unsigned int>("u32", {}, {}, adios2::Dims{4, 2}); auto &var_u64 = io.DefineVariable<unsigned long>( "u64", {}, {}, adios2::Dims{4, 2}); auto &var_r32 = io.DefineVariable<float>("r32", {}, {}, adios2::Dims{4, 2}); auto &var_r64 = io.DefineVariable<double>("r64", {}, {}, adios2::Dims{4, 2}); } // Create the BP Engine io.SetEngine("BPFileWriter"); io.AddTransport("file", {{"Library", "stdio"}}); auto engine = io.Open(fname, adios2::OpenMode::Write); ASSERT_NE(engine.get(), nullptr); for (size_t step = 0; step < 3; ++step) { // Retrieve the variables that previously went out of scope auto &var_i8 = io.GetVariable<char>("i8"); auto &var_i16 = io.GetVariable<short>("i16"); auto &var_i32 = io.GetVariable<int>("i32"); auto &var_i64 = io.GetVariable<long>("i64"); auto &var_u8 = io.GetVariable<unsigned char>("u8"); auto &var_u16 = io.GetVariable<unsigned short>("u16"); auto &var_u32 = io.GetVariable<unsigned int>("u32"); auto &var_u64 = io.GetVariable<unsigned long>("u64"); auto &var_r32 = io.GetVariable<float>("r32"); auto &var_r64 = io.GetVariable<double>("r64"); // Write each one engine->Write(var_i8, m_TestData.I8.data() + step); engine->Write(var_i16, m_TestData.I16.data() + step); engine->Write(var_i32, m_TestData.I32.data() + step); engine->Write(var_i64, m_TestData.I64.data() + step); engine->Write(var_u8, m_TestData.U8.data() + step); engine->Write(var_u16, m_TestData.U16.data() + step); engine->Write(var_u32, m_TestData.U32.data() + step); engine->Write(var_u64, m_TestData.U64.data() + step); engine->Write(var_r32, m_TestData.R32.data() + step); engine->Write(var_r64, m_TestData.R64.data() + step); // Advance to the next time step engine->Advance(); } // Close the file engine->Close(); } // Read test data using ADIOS1 #ifdef ADIOS2_HAVE_MPI // Read everything from rank 0 int rank; MPI_Comm_rank(); if (rank == 0) #endif { adios_read_init_method(ADIOS_READ_METHOD_BP, MPI_COMM_WORLD, "verbose=3"); // Open the file for reading ADIOS_FILE *f = adios_read_open_file((fname + ".dir/" + fname + ".0").c_str(), ADIOS_READ_METHOD_BP, MPI_COMM_WORLD); ASSERT_NE(f, nullptr); // Check the variables exist ADIOS_VARINFO *var_i8 = adios_inq_var(f, "i8"); ASSERT_NE(var_i8, nullptr); ASSERT_EQ(var_i8->ndim, 2); ASSERT_EQ(var_i8->dims[0], 4); ASSERT_EQ(var_i8->dims[1], 2); ADIOS_VARINFO *var_i16 = adios_inq_var(f, "i16"); ASSERT_NE(var_i16, nullptr); ASSERT_EQ(var_i16->ndim, 2); ASSERT_EQ(var_i16->dims[0], 4); ASSERT_EQ(var_i16->dims[1], 2); ADIOS_VARINFO *var_i32 = adios_inq_var(f, "i32"); ASSERT_NE(var_i32, nullptr); ASSERT_EQ(var_i32->ndim, 2); ASSERT_EQ(var_i32->dims[0], 4); ASSERT_EQ(var_i32->dims[1], 2); ADIOS_VARINFO *var_i64 = adios_inq_var(f, "i64"); ASSERT_NE(var_i64, nullptr); ASSERT_EQ(var_i64->ndim, 2); ASSERT_EQ(var_i64->dims[0], 4); ASSERT_EQ(var_i64->dims[1], 2); ADIOS_VARINFO *var_u8 = adios_inq_var(f, "u8"); ASSERT_NE(var_u8, nullptr); ASSERT_EQ(var_u8->ndim, 2); ASSERT_EQ(var_u8->dims[0], 4); ASSERT_EQ(var_u8->dims[1], 2); ADIOS_VARINFO *var_u16 = adios_inq_var(f, "u16"); ASSERT_NE(var_u16, nullptr); ASSERT_EQ(var_u16->ndim, 2); ASSERT_EQ(var_u16->dims[0], 4); ASSERT_EQ(var_u16->dims[1], 2); ADIOS_VARINFO *var_u32 = adios_inq_var(f, "u32"); ASSERT_NE(var_u32, nullptr); ASSERT_EQ(var_u32->ndim, 2); ASSERT_EQ(var_u32->dims[0], 4); ASSERT_EQ(var_u32->dims[1], 2); ADIOS_VARINFO *var_u64 = adios_inq_var(f, "u64"); ASSERT_NE(var_u64, nullptr); ASSERT_EQ(var_u64->ndim, 2); ASSERT_EQ(var_u64->dims[0], 4); ASSERT_EQ(var_u64->dims[1], 2); ADIOS_VARINFO *var_r32 = adios_inq_var(f, "r32"); ASSERT_NE(var_r32, nullptr); ASSERT_EQ(var_r32->ndim, 2); ASSERT_EQ(var_r32->dims[0], 4); ASSERT_EQ(var_r32->dims[1], 2); ADIOS_VARINFO *var_r64 = adios_inq_var(f, "r64"); ASSERT_NE(var_r64, nullptr); ASSERT_EQ(var_r64->ndim, 2); ASSERT_EQ(var_r64->dims[0], 4); ASSERT_EQ(var_r64->dims[1], 2); std::array<char, 8> I8; std::array<int16_t, 8> I16; std::array<int32_t, 8> I32; std::array<int64_t, 8> I64; std::array<unsigned char, 8> U8; std::array<uint16_t, 8> U16; std::array<uint32_t, 8> U32; std::array<uint64_t, 8> U64; std::array<float, 8> R32; std::array<double, 8> R64; uint64_t start[2] = {0, 0}; uint64_t count[2] = {4, 2}; ADIOS_SELECTION *sel = adios_selection_boundingbox(2, start, count); // Read stuff for (size_t t = 0; t < 3; ++t) { // Read the current step adios_schedule_read_byid(f, sel, var_i8->varid, t, 1, I8.data()); adios_schedule_read_byid(f, sel, var_i16->varid, t, 1, I16.data()); adios_schedule_read_byid(f, sel, var_i32->varid, t, 1, I32.data()); adios_schedule_read_byid(f, sel, var_i64->varid, t, 1, I64.data()); adios_schedule_read_byid(f, sel, var_u8->varid, t, 1, U8.data()); adios_schedule_read_byid(f, sel, var_u16->varid, t, 1, U16.data()); adios_schedule_read_byid(f, sel, var_u32->varid, t, 1, U32.data()); adios_schedule_read_byid(f, sel, var_u64->varid, t, 1, U64.data()); adios_schedule_read_byid(f, sel, var_r32->varid, t, 1, R32.data()); adios_schedule_read_byid(f, sel, var_r64->varid, t, 1, R64.data()); adios_perform_reads(f, 1); // Check if it's correct for (size_t i = 0; i < 8; ++i) { std::stringstream ss; ss << "t=" << t << " i=" << i; std::string msg = ss.str(); EXPECT_EQ(I8[i], m_TestData.I8[i + t]) << msg; EXPECT_EQ(I16[i], m_TestData.I16[i + t]) << msg; EXPECT_EQ(I32[i], m_TestData.I32[i + t]) << msg; EXPECT_EQ(I64[i], m_TestData.I64[i + t]) << msg; EXPECT_EQ(U8[i], m_TestData.U8[i + t]) << msg; EXPECT_EQ(U16[i], m_TestData.U16[i + t]) << msg; EXPECT_EQ(U32[i], m_TestData.U32[i + t]) << msg; EXPECT_EQ(U64[i], m_TestData.U64[i + t]) << msg; EXPECT_EQ(R32[i], m_TestData.R32[i + t]) << msg; EXPECT_EQ(R64[i], m_TestData.R64[i + t]) << msg; } } adios_selection_delete(sel); // Cleanup variable structures adios_free_varinfo(var_i8); adios_free_varinfo(var_i16); adios_free_varinfo(var_i32); adios_free_varinfo(var_i64); adios_free_varinfo(var_u8); adios_free_varinfo(var_u16); adios_free_varinfo(var_u32); adios_free_varinfo(var_u64); adios_free_varinfo(var_r32); adios_free_varinfo(var_r64); // Cleanup file adios_read_close(f); } } // ADIOS2 write, ADIOS2 read TEST_F(BPWriteReadTest, DISABLED_ADIOS2BPWriteADIOS2BPRead2D4x2stdio) { std::string fname = "ADIOS2BPWriteADIOS2BPRead2D4x2Teststdio.bp"; ASSERT_TRUE(false) << "ADIOS2 read API is not yet implemented"; } //****************************************************************************** // main //****************************************************************************** int main(int argc, char **argv) { #ifdef ADIOS2_HAVE_MPI MPI_Init(nullptr, nullptr); #endif ::testing::InitGoogleTest(&argc, argv); int result = RUN_ALL_TESTS(); #ifdef ADIOS2_HAVE_MPI MPI_Finalize(); #endif return result; }