gmt: 6.4.0 -> 6.5.0; fix build

{

  lib,

  stdenv,

  fetchurl,

  fetchFromGitHub,

  cmake,

  curl,

  darwin,

  gdal,

  blas,

  lapack,

  glibc,

  ghostscript,

  dcw-gmt,

  gshhg-gmt,

  libxml2,

}:

/*

  The onus is on the user to also install:

   - ffmpeg for webm or mp4 output

   - graphicsmagick for gif output

*/

stdenv.mkDerivation (finalAttrs: {

  pname = "gmt";

  version = "6.4.0";

  src = fetchurl {

    url = "https://github.com/GenericMappingTools/gmt/releases/download/${finalAttrs.version}/gmt-${finalAttrs.version}-src.tar.gz";

    sha256 = "sha256-0mfAx9b7MMnqfgKe8n2tsm/9e5LLS0cD+aO6Do85Ohs=";

  version = "6.5.0";

  src = fetchFromGitHub {

    owner = "GenericMappingTools";

    repo = "gmt";

    rev = "refs/tags/${finalAttrs.version}";

    hash = "sha256-KKIYhljCtk9t9CuvTLsSGvUkUwazWTm9ymBB3wLwSoI=";

  };

  nativeBuildInputs = [ cmake ];

  env = {

    NIX_LDFLAGS = "-lxml2 -L${lib.getLib (libxml2.override { enableHttp = true; })}/lib";

    NIX_CFLAGS_COMPILE =

      lib.optionalString stdenv.cc.isClang "-Wno-implicit-function-declaration "

      + lib.optionalString (

        stdenv.isDarwin

        && lib.versionOlder (darwin.apple_sdk.MacOSX-SDK.version or darwin.apple_sdk.sdk.version) "13.3"

      ) "-D__LAPACK_int=int";

  };

  buildInputs =

    [

      curl

        ]

      else

        [

          glibc

          fftwSinglePrec

          blas

          lapack

  cmakeFlags =

    [

      "-DGMT_DOCDIR=share/doc/gmt"

      "-DGMT_MANDIR=share/man"

      "-DGMT_LIBDIR=lib"

      "-DCOPY_GSHHG:BOOL=FALSE"

      "-DGSHHG_ROOT=${gshhg-gmt.out}/share/gshhg-gmt"

      "-DCOPY_DCW:BOOL=FALSE"

      "-DDCW_ROOT=${dcw-gmt.out}/share/dcw-gmt"

      "-DGDAL_ROOT=${gdal.out}"

      "-DNETCDF_ROOT=${netcdf.out}"

      "-DPCRE_ROOT=${pcre.out}"

      "-DGMT_INSTALL_TRADITIONAL_FOLDERNAMES:BOOL=FALSE"

      "-DGMT_ENABLE_OPENMP:BOOL=TRUE"

      "-DGMT_INSTALL_MODULE_LINKS:BOOL=FALSE"

      "-DLICENSE_RESTRICTED=LGPL" # "GPL" and "no" also valid

      (lib.cmakeFeature "GMT_DOCDIR" "share/doc/gmt")

      (lib.cmakeFeature "GMT_MANDIR" "share/man")

      (lib.cmakeFeature "GMT_LIBDIR" "lib")

      (lib.cmakeBool "COPY_GSHHG" false)

      (lib.cmakeFeature "GSHHG_ROOT" "${gshhg-gmt.out}/share/gshhg-gmt")

      (lib.cmakeBool "COPY_DCW" false)

      (lib.cmakeFeature "DCW_ROOT" "${dcw-gmt.out}/share/dcw-gmt")

      (lib.cmakeFeature "GDAL_ROOT" "${gdal.out}")

      (lib.cmakeFeature "NETCDF_ROOT" "${netcdf.out}")

      (lib.cmakeFeature "PCRE_ROOT" "${pcre.out}")

      (lib.cmakeBool "GMT_INSTALL_TRADITIONAL_FOLDERNAMES" false)

      (lib.cmakeBool "GMT_ENABLE_OPENMP" true)

      (lib.cmakeBool "GMT_INSTALL_MODULE_LINKS" false)

      (lib.cmakeFeature "LICENSE_RESTRICTED" "LGPL")

    ]

    ++ (

      with stdenv;

      lib.optionals (!isDarwin) [

        "-DFFTW3_ROOT=${fftwSinglePrec.dev}"

        "-DLAPACK_LIBRARY=${lapack}/lib/liblapack.so"

        "-DBLAS_LIBRARY=${blas}/lib/libblas.so"

      ]

    );

    ++ (lib.optionals (!stdenv.isDarwin) [

      (lib.cmakeFeature "FFTW3_ROOT" "${fftwSinglePrec.dev}")

      (lib.cmakeFeature "LAPACK_LIBRARY" "${lib.getLib lapack}/lib/liblapack.so")

      (lib.cmakeFeature "BLAS_LIBRARY" "${lib.getLib blas}/lib/libblas.so")

    ]);

  meta = with lib; {

  meta = {

    homepage = "https://www.generic-mapping-tools.org";

    description = "Tools for manipulating geographic and cartesian data sets";

    longDescription = ''

      transformations and includes supporting data such as coastlines, rivers,

      and political boundaries and optionally country polygons.

    '';

    platforms = [

      "x86_64-linux"

      "x86_64-darwin"

    ];

    license = licenses.lgpl3Plus;

    maintainers = with maintainers; [ tviti ];

    platforms = lib.platforms.unix;

    license = lib.licenses.lgpl3Plus;

    maintainers = with lib.maintainers; [ tviti ];

  };

})