Unverified Commit f3cc7197 authored by Florian's avatar Florian Committed by GitHub
Browse files

Merge pull request #329403 from gador/datalad-gooey-init 

datalad-gooey:  init at unstable-2024-02-20
parents 556126cb e89304a6

pkgs/development/python-modules/datalad-gooey/default.nix

0 → 100644
+64 −0
Original line number Diff line number Diff line 
{

  buildPythonPackage,

  lib,

  git,

  fetchFromGitHub,

  darwin,

  setuptools,

  stdenv,

  git-annex,

  pyside6,

  pyqtdarktheme,

  datalad-next,

  outdated,

  datalad,

  pytestCheckHook,

  pytest-qt,

}:



buildPythonPackage {

  pname = "datalad-gooey";

  # many bug fixes on `master` but no new release

  version = "unstable-2024-02-20";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "datalad";

    repo = "datalad-gooey";

    rev = "5bd6b9257ff1569439d2a77663271f5d665e61b6";

    hash = "sha256-8779SLcV4wwJ3124lteGzvimDxgijyxa818ZrumPMs4=";

  };



  build-system = [ setuptools ];



  dependencies = [

    pyside6

    pyqtdarktheme

    datalad-next

    outdated

    datalad

  ] ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AppleScriptKit ];



  pythonRemoveDeps = [ "applescript" ];



  preCheck = ''

    export HOME=$TMPDIR

  '';



  nativeCheckInputs = [

    pytestCheckHook

    pytest-qt

    git

    git-annex

  ];



  pythonImportsCheck = [ "datalad_gooey" ];



  meta = {

    description = "Graphical user interface (GUI) for DataLad";

    homepage = "https://github.com/datalad/datalad-gooey";

    license = lib.licenses.mit;

    maintainers = with lib.maintainers; [ gador ];

    mainProgram = "datalad-gooey";

  };

}

pkgs/development/python-modules/datalad-next/default.nix

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+115 −0
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{

  annexremote,

  buildPythonPackage,

  datalad,

  datasalad,

  fetchFromGitHub,

  git,

  git-annex,

  humanize,

  lib,

  more-itertools,

  psutil,

  pytestCheckHook,

  setuptools,

  openssh,

  unzip,

  versioneer,

  webdavclient3,

}:



buildPythonPackage rec {

  pname = "datalad-next";

  version = "1.5.0";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "datalad";

    repo = "datalad-next";

    rev = "refs/tags/${version}";

    hash = "sha256-fqP6nG2ncDRg48kvlsmPjNBOzfQp9+7wTcGvsYVrRzA=";

  };



  postPatch = ''

    # Remove vendorized versioneer.py

    rm versioneer.py

  '';



  nativeBuildInputs = [ git ];



  build-system = [

    setuptools

    versioneer

  ];



  dependencies = [

    annexremote

    datasalad

    datalad

    humanize

    more-itertools

  ];



  preCheck = ''

    export HOME=$TMPDIR

  '';



  nativeCheckInputs = [

    pytestCheckHook

    webdavclient3

    psutil

    git-annex

    datalad

    openssh

    unzip

  ];



  disabledTests = [

    # remotes available after datalad-next install (through `console_scripts`), but not yet in $PATH during test

    "test_uncurl_addurl_unredirected"

    "test_uncurl"

    "test_uncurl_ria_access"

    "test_uncurl_store"

    "test_uncurl_remove"

    "test_uncurl_testremote"

    "test_replace_add_archive_content"

    "test_annex_remote"

    "test_export_remote"

    "test_annex_remote_autorepush"

    "test_export_remote_autorepush"

    "test_typeweb_annex"

    "test_typeweb_annex_uncompressed"

    "test_typeweb_export"

    "test_submodule_url"

    "test_uncurl_progress_reporting_to_annex"

    "test_archivist_retrieval"

    "test_archivist_retrieval_legacy"



    # hardcoded /bin path

    "test_auto_if_wanted_data_transfer_path_restriction"



    # requires internet access

    "test_push_wanted"

    "test_auto_data_transfer"

    "test_http_url_operations"

    "test_transparent_decompression"

    "test_compressed_file_stay_compressed"

    "test_ls_file_collection_tarfile"

    "test_iter_tar"

  ];



  disabledTestPaths = [

    # requires internet access

    "datalad_next/commands/tests/test_download.py"

    "datalad_next/archive_operations/tests/test_tarfile.py"

  ];

  pythonImportsCheck = [ "datalad_next" ];



  meta = {

    description = "DataLad extension with a staging area for additional functionality, or for improved performance and user experience";

    changelog = "https://github.com/datalad/datalad-next/blob/main/CHANGELOG.md";

    homepage = "https://github.com/datalad/datalad-next";

    license = lib.licenses.mit;

    maintainers = with lib.maintainers; [ gador ];

  };

}

pkgs/applications/version-management/datalad/default.nix→pkgs/development/python-modules/datalad/default.nix

+55 −10
Original line number Diff line number Diff line 
{

  buildPythonPackage,

  lib,

  setuptools,

  stdenv,

  fetchFromGitHub,

  installShellFiles,

  python3,

  git,

  coreutils,

  versioneer,

  # core

  platformdirs,

  chardet,

  iso8601,

  humanize,

  fasteners,

  packaging,

  patool,

  tqdm,

  annexremote,

  looseversion,

  git-annex,

  # downloaders

  boto3,

  keyrings-alt,

  keyring,

  msgpack,

  requests,

  # publish

  python-gitlab,

  # misc

  argcomplete,

  pyperclip,

  python-dateutil,

  # duecredit

  duecredit,

  # python>=3.8

  distro,

  # win

  colorama,

  # python-version-dependent

  pythonOlder,

  importlib-resources,

  importlib-metadata,

  typing-extensions,

  # tests

  pytestCheckHook,

  p7zip,

  curl,

  coreutils,

  httpretty,

}:



python3.pkgs.buildPythonApplication rec {

buildPythonPackage rec {

  pname = "datalad";

  version = "1.1.1";
@@ -25,6 +64,8 @@ python3.pkgs.buildPythonApplication rec { 
  postPatch = ''

    substituteInPlace datalad/distribution/create_sibling.py \

      --replace-fail "/bin/ls" "${coreutils}/bin/ls"

    # Remove vendorized versioneer.py

    rm versioneer.py

  '';



  nativeBuildInputs = [
@@ -32,10 +73,12 @@ python3.pkgs.buildPythonApplication rec { 
    git

  ];



  build-system = [ python3.pkgs.setuptools ];

  build-system = [

    setuptools

    versioneer

  ];



  dependencies =

    with python3.pkgs;

    [

      # core

      platformdirs
@@ -68,15 +111,17 @@ python3.pkgs.buildPythonApplication rec { 
      argcomplete

      pyperclip

      python-dateutil



      # duecredit

      duecredit



      # python>=3.8

      distro

    ]

    ++ lib.optionals stdenv.hostPlatform.isWindows [ colorama ]

    ++ lib.optionals (python3.pythonOlder "3.9") [ importlib-resources ]

    ++ lib.optionals (python3.pythonOlder "3.10") [ importlib-metadata ]

    ++ lib.optionals (python3.pythonOlder "3.11") [ typing_extensions ];

    ++ lib.optionals (pythonOlder "3.9") [ importlib-resources ]

    ++ lib.optionals (pythonOlder "3.10") [ importlib-metadata ]

    ++ lib.optionals (pythonOlder "3.11") [ typing-extensions ];



  postInstall = ''

    installShellCompletion --cmd datalad \
@@ -180,10 +225,10 @@ python3.pkgs.buildPythonApplication rec { 


  nativeCheckInputs = [

    p7zip

    python3.pkgs.pytestCheckHook

    pytestCheckHook

    git-annex

    curl

    python3.pkgs.httpretty

    httpretty

  ];



  pythonImportsCheck = [ "datalad" ];

pkgs/development/python-modules/datasalad/default.nix

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+46 −0
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{

  buildPythonPackage,

  fetchFromGitHub,

  hatchling,

  hatch-vcs,

  lib,

  more-itertools,

  psutil,

  pytestCheckHook,

  unzip,

}:



buildPythonPackage rec {

  pname = "datasalad";

  version = "0.2.1";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "datalad";

    repo = "datasalad";

    rev = "refs/tags/v${version}";

    hash = "sha256-qgHWTokNBzJcBbEPCA/YfklzqyX1lM2yro7ElqBfrig=";

  };



  build-system = [

    hatchling

    hatch-vcs

  ];



  nativeCheckInputs = [

    pytestCheckHook

    more-itertools

    psutil

    unzip

  ];



  pythonImportsCheck = [ "datasalad" ];



  meta = {

    description = "Pure-Python library with a collection of utilities for working with Git and git-annex";

    changelog = "https://github.com/datalad/datasalad/blob/main/CHANGELOG.md";

    homepage = "https://github.com/datalad/datasalad";

    license = lib.licenses.mit;

    maintainers = with lib.maintainers; [ gador ];

  };

}

pkgs/development/python-modules/outdated/default.nix

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+40 −0
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{

  buildPythonPackage,

  fetchFromGitHub,

  lib,

  littleutils,

  requests,

  setuptools-scm,

}:



buildPythonPackage rec {

  pname = "outdated";

  version = "0.2.2";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "alexmojaki";

    repo = "outdated";

    rev = "refs/tags/v${version}";

    hash = "sha256-5VpPmgIcVtY97F0Hb0m9MuSW0zjaUJ18ATA4GBRw+jc=";

  };



  build-system = [ setuptools-scm ];



  dependencies = [

    littleutils

    requests

  ];



  # checks rely on internet connection

  doCheck = false;



  pythonImportsCheck = [ "outdated" ];



  meta = {

    description = "Mini-library which, given a package name and a version, checks if it's the latest version available on PyPI";

    homepage = "https://github.com/alexmojaki/outdated";

    license = lib.licenses.mit;

    maintainers = with lib.maintainers; [ gador ];

  };

}