pdi: init at 1.7.1

{

  lib,

  stdenv,

  fetchFromGitHub,

  # nativeBuildInputs

  python3,

  cmake,

  gfortran,

  pkg-config,

  hdf5-mpi,

  zpp,

  # buildInputs

  gbenchmark,

  libyaml,

  mpi,

  spdlog,

  # passthru

  nix-update-script,

  testers,

  pdi,

}:

let

  python = python3.withPackages (

    p: with p; [

      distutils

      setuptools

    ]

  );

in

stdenv.mkDerivation rec {

  pname = "pdi";

  version = "1.7.1";

  src = fetchFromGitHub {

    owner = "pdidev";

    repo = "pdi";

    rev = "refs/tags/${version}-gh";

    hash = "sha256-VTbXsUUJb/6zNyn4QXNHajgzzgjSwdW/d+bTSDcpRaE=";

  };

  # Current hdf5 version in nixpkgs is 1.14.4.3 which is 4 numbers long and doesn't match the 3 number regex. :')

  # Patch it to make it match a 4 number-long version.

  postPatch = ''

    substituteInPlace plugins/decl_hdf5/cmake/FindHDF5.cmake \

      --replace-fail '"H5_VERSION[ \t]+\"([0-9]+\\.[0-9]+\\.[0-9]+)' '"H5_VERSION[ \t]+\"([0-9]+\\.[0-9]+\\.[0-9]+\\.[0-9]+)'

  '';

  nativeBuildInputs = [

    cmake

    gfortran

    pkg-config

    python

    hdf5-mpi

    zpp

  ];

  buildInputs = [

    gbenchmark

    hdf5-mpi

    libyaml

    mpi

    spdlog

  ];

  cmakeFlags = [

    # Force using nix gbenchmark instead of vendored version

    "-DUSE_benchmark=SYSTEM"

  ];

  passthru = {

    updateScript = nix-update-script { };

    tests.version = testers.testVersion {

      package = pdi;

      command = "pdirun";

    };

  };

  meta = {

    description = "PDI supports loose coupling of simulation codes with data handling libraries";

    homepage = "https://pdi.dev/master/";

    license = lib.licenses.bsd3;

    mainProgram = "pdirun";

    maintainers = with lib.maintainers; [ GaetanLepage ];

  };

}