Merge pull request #205299 from linsui/jabref

, perl

}:

let

  versionReplace = {

    easybind = {

      snapshot = "2.2.1-SNAPSHOT";

      pin = "2.2.1-20230117.075740-16";

    };

    afterburner = {

      snapshot = "testmoduleinfo-SNAPSHOT";

      pin = "0e337d8773";

    };

  };

in

stdenv.mkDerivation rec {

  version = "5.7";

  version = "5.9";

  pname = "jabref";

  src = fetchFromGitHub {

    owner = "JabRef";

    repo = "jabref";

    rev = "v${version}";

    hash = "sha256-wzBaAaxGsMPh64uW+bBOiycYfVCW9H5FCn06r6XdxeE=";

    hash = "sha256-uACmXas5L1NcxLwllkcbgCCt9bRicpQkiJkhkkVWDDY=";

  };

  desktopItems = [

  deps = stdenv.mkDerivation {

    pname = "${pname}-deps";

    inherit src version;

    inherit src version postPatch;

    nativeBuildInputs = [ gradle perl ];

    buildPhase = ''

      export GRADLE_USER_HOME=$(mktemp -d)

      gradle --no-daemon downloadDependencies

      gradle --no-daemon downloadDependencies -Dos.arch=amd64

      gradle --no-daemon downloadDependencies -Dos.arch=aarch64

    '';

    # perl code mavenizes pathes (com.squareup.okio/okio/1.13.0/a9283170b7305c8d92d25aff02a6ab7e45d06cbe/okio-1.13.0.jar -> com/squareup/okio/okio/1.13.0/okio-1.13.0.jar)

    installPhase = ''

      find $GRADLE_USER_HOME/caches/modules-2 -type f -regex '.*\.\(jar\|pom\)' \

        | perl -pe 's#(.*/([^/]+)/([^/]+)/([^/]+)/[0-9a-f]{30,40}/([^/\s]+))$# ($x = $2) =~ tr|\.|/|; "install -Dm444 $1 \$out/$x/$3/$4/''${\($5 =~ s/-jvm//r)}" #e' \

        | sh

      mv $out/com/tobiasdiez/easybind/${versionReplace.easybind.pin} \

        $out/com/tobiasdiez/easybind/${versionReplace.easybind.snapshot}

    '';

    # Don't move info to share/

    forceShare = [ "dummy" ];

    outputHashMode = "recursive";

    outputHash = {

      x86_64-linux = "sha256-OicHJVFxHGPE76bEDoLhkEhVcAJmplqjoh2I3nnVaLA=";

      aarch64-linux = "sha256-8QWmweptL/+pSO6DhfBLaLcBrfKd4TDsDoXs4TgXvew=";

    }.${stdenv.hostPlatform.system} or (throw "Unsupported system ${stdenv.hostPlatform.system}");

    outputHash = "sha256-s6GA8iT3UEVuELBgpBvzPJlVX+9DpfOQrEd3KIth8eA=";

  };

  postPatch = ''

    # Pin the version

    substituteInPlace build.gradle \

      --replace 'com.github.JabRef:afterburner.fx:${versionReplace.afterburner.snapshot}' \

        'com.github.JabRef:afterburner.fx:${versionReplace.afterburner.pin}' \

      --replace 'com.tobiasdiez:easybind:${versionReplace.easybind.snapshot}' \

        'com.tobiasdiez:easybind:${versionReplace.easybind.pin}'

  '';

  preBuild = ''

    # Include CSL styles and locales in our build

    cp -r buildres/csl/* src/main/resources/

    # Resources in the jar can't be found, workaround copied from AUR

    cp -r build/resources $out/share/java/jabref

    # workaround for https://github.com/NixOS/nixpkgs/issues/162064

    tar xf build/distributions/JabRef-${version}.tar -C $out --strip-components=1

    unzip $out/lib/javafx-web-*-linux${lib.optionalString stdenv.isAarch64 "-aarch64"}.jar libjfxwebkit.so -d $out/lib/

    # remove openjfx libs for other platforms

    rm $out/lib/javafx-*-win.jar ${lib.optionalString stdenv.isAarch64 "$out/lib/javafx-*-linux.jar"}

    # workaround for https://github.com/NixOS/nixpkgs/issues/162064

    unzip $out/lib/javafx-web-*.jar libjfxwebkit.so -d $out/lib/

    DEFAULT_JVM_OPTS=$(sed -n -E "s/^DEFAULT_JVM_OPTS='(.*)'$/\1/p" $out/bin/JabRef | sed -e "s|\$APP_HOME|$out|g" -e 's/"//g')

    rm $out/bin/*

  };

  jabref = callPackage ../applications/office/jabref {

    jdk = javaPackages.compiler.openjdk18;

    jdk = jdk19.override { enableJavaFX = true; };

    gradle = gradle_7;

  };

  jack_capture = callPackage ../applications/audio/jack-capture { };