Unverified Commit e3f9d353 authored by natsukium's avatar natsukium
Browse files

hmmer: enable tests

parent 0890b813

pkgs/by-name/hm/hmmer/package.nix

+26 −0
Original line number Diff line number Diff line
@@ -2,6 +2,10 @@ 
  lib,

  stdenv,

  fetchurl,

  easel,

  perl,

  python3,

  versionCheckHook,

}:



stdenv.mkDerivation rec {
@@ -13,6 +17,28 @@ stdenv.mkDerivation rec { 
    sha256 = "sha256-ynDZT9DPJxvXBjQjqrsRbULeUzEXNDqbJ6ZcF/8G+/M=";

  };



  enableParallelBuilding = true;



  doCheck = true;



  nativeCheckInputs = [

    perl

    python3

  ];



  preCheck = ''

    install -Dm755 ${easel.src}/devkit/sqc easel/devkit/sqc

    patchShebangs easel/devkit/sqc testsuite/* src/hmmpress.itest.pl

  '';



  doInstallCheck = true;



  nativeInstallCheckInputs = [ versionCheckHook ];



  versionCheckProgram = "${placeholder "out"}/bin/hmmalign";



  versionCheckProgramArg = [ "-h" ];



  meta = with lib; {

    description = "Biosequence analysis using profile hidden Markov models";

    longDescription = ''