Commit e027a5d8 authored by Alexis Praga's avatar Alexis Praga
Browse files

kent: package headers too. 

This is needed for perlPackages.BioBigFile.
Removing NIX_BUILD_TOP.
parent caf436a5

pkgs/applications/science/biology/kent/default.nix

+12 −12
Original line number Diff line number Diff line
@@ -43,22 +43,22 @@ stdenv.mkDerivation rec { 
    export CFLAGS="-fPIC"

    export MYSQLINC=$(mysql_config --include | sed -e 's/^-I//g')

    export MYSQLLIBS=$(mysql_config --libs)

    export DESTBINDIR=$NIX_BUILD_TOP/bin

    export HOME=$NIX_BUILD_TOP

    export HOME=$TMPDIR

    export DESTBINDIR=$HOME/bin



    mkdir -p $HOME/lib $HOME/bin/x86_64



    cd ./src

    chmod +x ./checkUmask.sh

    ./checkUmask.sh



    mkdir -p $NIX_BUILD_TOP/lib

    mkdir -p $NIX_BUILD_TOP/bin/x86_64



    make libs

    cd jkOwnLib

    make



    cp ../lib/x86_64/jkOwnLib.a $NIX_BUILD_TOP/lib

    cp ../lib/x86_64/jkweb.a $NIX_BUILD_TOP/lib

    cp ../lib/x86_64/jkOwnLib.a $HOME/lib

    cp ../lib/x86_64/jkweb.a $HOME/lib

    cp -r ../inc  $HOME/



    cd ../utils

    make
@@ -69,11 +69,11 @@ stdenv.mkDerivation rec { 
  installPhase = ''

    runHook preInstall



    mkdir -p $out/bin

    mkdir -p $out/lib

    cp $NIX_BUILD_TOP/lib/jkOwnLib.a $out/lib

    cp $NIX_BUILD_TOP/lib/jkweb.a $out/lib

    cp $NIX_BUILD_TOP/bin/x86_64/* $out/bin

    mkdir -p $out/bin $out/lib $out/inc

    cp $HOME/lib/jkOwnLib.a $out/lib

    cp $HOME/lib/jkweb.a $out/lib

    cp $HOME/bin/x86_64/* $out/bin

    cp -r $HOME/inc/* $out/inc/



    runHook postInstall

  '';