Commit dcb93f27 authored by László Kupcsik's avatar László Kupcsik
Browse files

libstaden-read: init at 1.15.0

Sort inputs alphabetically in libstaden

Remove gcc from libstaden deps
parent 1fb2ef09
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+12 −0
Original line number Diff line number Diff line
diff --git a/Makefile.am b/Makefile.am
index 31286d1..2631af1 100644
--- a/Makefile.am
+++ b/Makefile.am
@@ -61,6 +61,7 @@ man_MANS = \
 	man/man4/Read.4
 
 pkginclude_HEADERS = \
+        io_lib_config.h \
 	io_lib/Read.h \
 	io_lib/scf_extras.h \
 	io_lib/translate.h \
+47 −0
Original line number Diff line number Diff line
{ lib
, stdenv
, autoreconfHook
, fetchFromGitHub
, bzip2
, xz
, zlib
}:

stdenv.mkDerivation (finalAttrs: {
  # Same name as the Debian library
  pname = "libstaden-read";
  version = "1.15.0";

  src = fetchFromGitHub {
    owner = "jkbonfield";
    repo = "io_lib";
    rev = "io_lib-" + builtins.replaceStrings ["."] ["-"] finalAttrs.version;
    fetchSubmodules = true;
    hash = "sha256-2Dlx+MXmqar81/Xmf0oE+6lWX461EDYijiZsZf/VD28=";
  };

  patches = [
    # Needed so that the lib can be detected
    ./libstaden-install-config-header.patch
  ];

  buildInputs = [ bzip2 xz zlib ];
  nativeBuildInputs = [ autoreconfHook ];

  # autoreconfHook does not descend into htscodecs folder
  preAutoreconf = ''
    pushd ./htscodecs
    autoreconf --install --force --verbose
    pushd
  '';

  meta = {
    description = "C library for reading/writing various DNA sequence formats";
    homepage = "https://staden.sourceforge.net";
    downloadPage = "https://github.com/jkbonfield/io_lib/releases";
    changelog = "https://github.com/jkbonfield/io_lib/blob/${finalAttrs.src.rev}/CHANGES";
    license = with lib.licenses; [ bsd3 free ];
    platforms = lib.platforms.all;
    maintainers = [ lib.maintainers.kupac ];
  };
})