Commit dbc45029 authored by Ben Darwin's avatar Ben Darwin Committed by github-actions[bot]
Browse files

inormalize: unstable-2014-10-21 -> 1.2.00-unstable-2023-01-19 

(cherry picked from commit 8f29f5ab)
parent bef541f8

pkgs/by-name/in/inormalize/lgmask-interp.patch

deleted100644 → 0
+0 −10
Original line number Diff line number Diff line 
diff --git a/lgmask.in b/lgmask.in

index 17dbe4d..2195d91 100644

--- a/lgmask.in

+++ b/lgmask.in

@@ -1,4 +1,4 @@

-#! @PERL@

+#! /usr/bin/env perl

 

 #---------------------------------------------------------------------------

 #@COPYRIGHT :

pkgs/by-name/in/inormalize/nu_correct_norm-interp.patch

deleted100644 → 0
+0 −10
Original line number Diff line number Diff line 
diff --git a/nu_correct_norm.in b/nu_correct_norm.in

index 1dc84ac..1bc6235 100644

--- a/nu_correct_norm.in

+++ b/nu_correct_norm.in

@@ -1,4 +1,4 @@

-#! @PERL@

+#! /usr/bin/perl

  

 #---------------------------------------------------------------------------

 #@COPYRIGHT :

pkgs/by-name/in/inormalize/package.nix

+13 −17
Original line number Diff line number Diff line
@@ -11,38 +11,34 @@ 


stdenv.mkDerivation {

  pname = "inormalize";

  version = "unstable-2014-10-21";

  version = "1.2.00-unstable-2023-01-19";



  src = fetchFromGitHub {

    owner = "BIC-MNI";

    repo = "inormalize";

    rev = "79cea9cdfe7b99abfd40afda89ab2253b596ad2f";

    sha256 = "1ahqv5q0ljvji99a5q8azjkdf6bgp6nr8lwivkqwqs3jm0k5clq7";

    rev = "4928e573165d76551c3d273ccf0c46f4fbab11fc";

    hash = "sha256-ZxTsPBsaL/5BWC7ew57um8LPb96hytI30JE8saBBNw8=";

  };



  patches = [

    ./lgmask-interp.patch

    ./nu_correct_norm-interp.patch

  ];



  postPatch = ''

    substituteInPlace inormalize.cc \

      --replace "clamp" "::clamp"

    substituteInPlace CMakeLists.txt \

      --replace-fail "CMAKE_MINIMUM_REQUIRED(VERSION 3.1)" "CMAKE_MINIMUM_REQUIRED(VERSION 3.10)"

  '';



  nativeBuildInputs = [

    cmake

    makeWrapper

  ];



  buildInputs = [

    libminc

    ebtks

  ];

  propagatedBuildInputs = with perlPackages; [

  ]

  ++ (with perlPackages; [

    perl

    GetoptTabular

    MNI-Perllib

  ];

  ]);



  cmakeFlags = [

    "-DLIBMINC_DIR=${libminc}/lib/cmake"
@@ -55,11 +51,11 @@ stdenv.mkDerivation { 
    done

  '';



  meta = with lib; {

  meta = {

    homepage = "https://github.com/BIC-MNI/inormalize";

    description = "Program to normalize intensity of MINC files";

    maintainers = with maintainers; [ bcdarwin ];

    platforms = platforms.unix;

    license = licenses.free;

    maintainers = with lib.maintainers; [ bcdarwin ];

    platforms = lib.platforms.unix;

    license = lib.licenses.free;

  };

}