python3Packages.swcgeom: init at 0.19.3

{

  lib,

  buildPythonPackage,

  fetchFromGitHub,

  cython,

  numpy,

  setuptools,

  wheel,

  imagecodecs,

  matplotlib,

  pandas,

  pynrrd,

  scipy,

  sdflit,

  seaborn,

  tifffile,

  tqdm,

  typing-extensions,

  beautifulsoup4,

  certifi,

  chardet,

  lmdb,

  requests,

  urllib3,

  pytest,

}:

let

  version = "0.19.3";

in

buildPythonPackage {

  pname = "swcgeom";

  inherit version;

  pyproject = true;

  src = fetchFromGitHub {

    owner = "yzx9";

    repo = "swcgeom";

    tag = "v${version}";

    hash = "sha256-mpp8Dw0XcU59fYt7vjswAnXCmrRP3mhbgTDG+J4UwzI=";

  };

  build-system = [

    cython

    numpy

    setuptools

    wheel

  ];

  dependencies = [

    imagecodecs

    matplotlib

    numpy

    pandas

    pynrrd

    scipy

    sdflit

    seaborn

    tifffile

    tqdm

    typing-extensions

  ];

  optional-dependencies = {

    all = [

      beautifulsoup4

      certifi

      chardet

      lmdb

      requests

      urllib3

    ];

  };

  nativeCheckInputs = [

    pytest

  ];

  pythonImportsCheck = [

    "swcgeom"

  ];

  meta = {

    description = "Neuron geometry library for swc format";

    homepage = "https://github.com/yzx9/swcgeom";

    changelog = "https://github.com/yzx9/swcgeom/blob/v${version}/CHANGELOG.md";

    license = lib.licenses.asl20;

    maintainers = with lib.maintainers; [ yzx9 ];

  };

}

  swagger-ui-bundle = callPackage ../development/python-modules/swagger-ui-bundle { };

  swcgeom = callPackage ../development/python-modules/swcgeom { };

  swh-auth = callPackage ../development/python-modules/swh-auth { };

  swh-core = callPackage ../development/python-modules/swh-core { };