Unverified Commit d72427d9 authored by TomaSajt's avatar TomaSajt
Browse files

python312Packages.scikit-bio: add missing deps

parent a9089570

pkgs/development/python-modules/scikit-bio/default.nix

+12 −2
Original line number Diff line number Diff line
@@ -2,9 +2,11 @@ 
  lib,

  buildPythonPackage,

  fetchFromGitHub,



  setuptools,

  cython,

  oldest-supported-numpy,



  requests,

  decorator,

  natsort,
@@ -12,8 +14,10 @@ 
  pandas,

  scipy,

  h5py,

  hdmedians,

  biom-format,

  statsmodels,

  patsy,



  python,

  pytestCheckHook,

}:
@@ -44,8 +48,9 @@ buildPythonPackage rec { 
    pandas

    scipy

    h5py

    hdmedians

    biom-format

    statsmodels

    patsy

  ];



  nativeCheckInputs = [ pytestCheckHook ];
@@ -53,6 +58,11 @@ buildPythonPackage rec { 
  # only the $out dir contains the built cython extensions, so we run the tests inside there

  pytestFlagsArray = [ "${placeholder "out"}/${python.sitePackages}/skbio" ];



  disabledTestPaths = [

    # don't know why, but this segfaults

    "${placeholder "out"}/${python.sitePackages}/skbio/metadata/tests/test_intersection.py"

  ];



  pythonImportsCheck = [ "skbio" ];



  meta = {