Unverified Commit c6f1ef99 authored by OTABI Tomoya's avatar OTABI Tomoya Committed by GitHub
Browse files

python312Packages.trx-python: init at 0.3; python312Packages.dipy: 1.7.0 -> 1.9.0 (#353282)

parents 9cc818cb b688cdd1

pkgs/development/python-modules/dipy/default.nix

+17 −7
Original line number Diff line number Diff line
@@ -3,6 +3,7 @@ 
  buildPythonPackage,

  fetchFromGitHub,

  pythonOlder,

  meson-python,

  packaging,

  cython,

  numpy,
@@ -10,33 +11,43 @@ 
  h5py,

  nibabel,

  tqdm,

  trx-python,

}:



buildPythonPackage rec {

  pname = "dipy";

  version = "1.7.0";

  format = "setuptools";

  version = "1.9.0";

  pyproject = true;



  disabled = pythonOlder "3.6";



  src = fetchFromGitHub {

    owner = "dipy";

    repo = pname;

    repo = "dipy";

    rev = "refs/tags/${version}";

    hash = "sha256-sfqCK2r9Io1gDDHL9s9R37J0h9KcOQML3B2zJx2+QuA=";

    hash = "sha256-6cpxuk2PL43kjQ+6UGiUHUXC7pC9OlW9kZvGOdEXyzw=";

  };



  nativeBuildInputs = [

  postPatch = ''

    substituteInPlace pyproject.toml \

      --replace-fail "numpy==" "numpy>="

  '';



  build-system = [

    cython

    meson-python

    numpy

    packaging

  ];



  propagatedBuildInputs = [

  dependencies = [

    numpy

    scipy

    h5py

    nibabel

    packaging

    tqdm

    trx-python

  ];



  # disable tests for now due to:
@@ -53,7 +64,6 @@ buildPythonPackage rec { 
    "dipy.reconst"

    "dipy.io"

    "dipy.viz"

    "dipy.boots"

    "dipy.data"

    "dipy.utils"

    "dipy.segment"

pkgs/development/python-modules/trx-python/default.nix

0 → 100644
+65 −0
Original line number Diff line number Diff line 
{

  lib,

  buildPythonPackage,

  fetchFromGitHub,

  cython,

  setuptools,

  setuptools-scm,

  deepdiff,

  nibabel,

  numpy,

  pytestCheckHook,

  psutil,

}:



buildPythonPackage rec {

  pname = "trx-python";

  version = "0.3";

  pyproject = true;



  src = fetchFromGitHub {

    owner = "tee-ar-ex";

    repo = "trx-python";

    rev = "refs/tags/${version}";

    hash = "sha256-gKPgP3GJ7QY0Piylk5L0HxnscRCREP1Hm5HZufL2h5g=";

  };



  build-system = [

    cython

    setuptools

    setuptools-scm

  ];



  dependencies = [

    deepdiff

    nibabel

    numpy

  ];



  pythonImportsCheck = [ "trx" ];



  nativeCheckInputs = [

    pytestCheckHook

    psutil

  ];



  preCheck = ''

    export HOME=$TMPDIR

  '';



  pytestFlagsArray = [ "trx/tests" ];



  disabledTestPaths = [

    # access to network

    "trx/tests/test_memmap.py"

    "trx/tests/test_io.py"

  ];



  meta = {

    description = "Python implementation of the TRX file format";

    homepage = "https://github.com/tee-ar-ex/trx-python";

    changelog = "https://github.com/tee-ar-ex/trx-python/releases/tag/${version}";

    license = lib.licenses.bsd2;

    maintainers = with lib.maintainers; [ ];

  };

}

pkgs/top-level/python-packages.nix

+2 −0
Original line number Diff line number Diff line
@@ -16116,6 +16116,8 @@ self: super: with self; { 














  truststore = callPackage ../development/python-modules/truststore { };



























  trx-python = callPackage ../development/python-modules/trx-python { };



























  trytond = callPackage ../development/python-modules/trytond { };





























  ts1-signatures = callPackage ../development/python-modules/ts1-signatures { };