python312Packages.pyfaidx: refactor

{ lib

, buildPythonPackage

, fetchPypi

, glibcLocales

, importlib-metadata

, nose

, numpy

, pytestCheckHook

, pythonOlder

, setuptools

, setuptools-scm

, six

, glibcLocales

, pytestCheckHook

}:

buildPythonPackage rec {

  pname = "pyfaidx";

  version = "0.8.1.1";

  format = "pyproject";

  pyproject = true;

  disabled = pythonOlder "3.7";

  src = fetchPypi {

    inherit pname version;

    hash = "sha256-bwSCNSYZ8sxWADyiIyG9sNB2S2VnlbweQGKx+psIaGs=";

  };

  nativeBuildInputs = [

  build-system = [

    setuptools

    setuptools-scm

  ];

  propagatedBuildInputs = [

  dependencies = [

    importlib-metadata

    six

  ];

  nativeCheckInputs = [

    glibcLocales

    nose

    numpy

    pytestCheckHook

  ];

  ];

  meta = with lib; {

    homepage = "https://github.com/mdshw5/pyfaidx";

    description = "Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index";

    mainProgram = "faidx";

    homepage = "https://github.com/mdshw5/pyfaidx";

    changelog = "https://github.com/mdshw5/pyfaidx/releases/tag/v${version}";

    license = licenses.bsd3;

    maintainers = with maintainers; [ jbedo ];

    mainProgram = "faidx";

  };

}