Merge pull request #249755 from natsukium/bamtools/init

{ lib

, stdenv

, fetchFromGitHub

, cmake

, jsoncpp

, pkg-config

, zlib

}:

stdenv.mkDerivation (finalAttrs: {

  pname = "bamtools";

  version = "2.5.2";

  src = fetchFromGitHub {

    owner = "pezmaster31";

    repo = "bamtools";

    rev = "refs/tags/v${finalAttrs.version}";

    hash = "sha256-l2DmA4P1kPneTCL9YVACE6LcQHT0F+mufPyM69VkksE=";

  };

  nativeBuildInputs = [

    cmake

    pkg-config

  ];

  buildInputs = [

    jsoncpp

    zlib

  ];

  doCheck = true;

  meta = with lib; {

    description = "C++ API & command-line toolkit for working with BAM data";

    homepage = "https://github.com/pezmaster31/bamtools";

    changelog = "https://github.com/pezmaster31/bamtools/releases/tag/${finalAttrs.src.rev}";

    license = licenses.mit;

    maintainers = with maintainers; [ natsukium ];

    platforms = platforms.unix;

  };

})

  archimedes = callPackage ../applications/science/electronics/archimedes { };

  bamtools = callPackage ../applications/science/biology/bamtools { };

  bayescan = callPackage ../applications/science/biology/bayescan { };

  bedops = callPackage ../applications/science/biology/bedops { };