Unverified Commit afc28e5d authored by Emily's avatar Emily Committed by GitHub
Browse files

metis: 5.1.0 -> 5.2.1 + cmake4 patch; gklib: init at 5.1.1-unstable-2025-07-15 (#444054)

parents c3c457ac 7f8cf3a9

pkgs/by-name/gk/gklib/package.nix

0 → 100644
+39 −0
Original line number Diff line number Diff line 
{

  lib,

  stdenv,

  fetchFromGitHub,

  cmake,

  llvmPackages,

}:



stdenv.mkDerivation (finalAttrs: {

  pname = "gklib";

  version = "5.1.1-unstable-2025-07-15";



  src = fetchFromGitHub {

    owner = "KarypisLab";

    repo = "GKlib";

    rev = "6e7951358fd896e2abed7887196b6871aac9f2f8";

    hash = "sha256-jT0hT5Y3E8GnE8OJWzDj5rtz9s59sMEXLduUnBV0I0Y=";

  };



  nativeBuildInputs = [ cmake ];



  buildInputs = lib.optional stdenv.cc.isClang llvmPackages.openmp;



  cmakeFlags = [

    (lib.cmakeBool "OPENMP" true)

    (lib.cmakeBool "BUILD_SHARED_LIBS" (!stdenv.hostPlatform.isStatic))

    # Turns off using clflush/sfence insns in gkuniq test app

    # https://github.com/KarypisLab/GKlib/issues/11#issuecomment-1532597211

    (lib.cmakeBool "NO_X86" (!stdenv.hostPlatform.isx86))

  ];



  meta = {

    description = "Library of various helper routines and frameworks used by many of the lab's software";

    homepage = "https://github.com/KarypisLab/GKlib";

    license = lib.licenses.asl20;

    maintainers = with lib.maintainers; [ qbisi ];

    platforms = lib.platforms.all;

  };

})

pkgs/by-name/me/metis/package.nix

+38 −16
Original line number Diff line number Diff line 
{

  lib,

  stdenv,

  fetchurl,

  unzip,

  fetchFromGitHub,

  fetchpatch,

  cmake,

  gklib,

  llvmPackages,

}:



stdenv.mkDerivation rec {

stdenv.mkDerivation (finalAttrs: {

  pname = "metis";

  version = "5.1.0";

  version = "5.2.1";



  src = fetchurl {

    url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-${version}.tar.gz";

    sha256 = "1cjxgh41r8k6j029yxs8msp3z6lcnpm16g5pvckk35kc7zhfpykn";

  src = fetchFromGitHub {

    owner = "KarypisLab";

    repo = "METIS";

    tag = "v${finalAttrs.version}";

    hash = "sha256-eddLR6DvZ+2LeR0DkknN6zzRvnW+hLN2qeI+ETUPcac=";

  };



  cmakeFlags = [

    "-DGKLIB_PATH=../GKlib"

    # remove once updated past https://github.com/KarypisLab/METIS/commit/521a2c360dc21ace5c4feb6dc0b7992433e3cb0f

    "-DCMAKE_SKIP_BUILD_RPATH=ON"

  patches = [

    # fix gklib link error

    (fetchpatch {

      url = "https://gitweb.gentoo.org/repo/gentoo.git/plain/sci-libs/metis/files/metis-5.2.1-add-gklib-as-required.patch?id=c78ecbd3fdf9b33e307023baf0de12c4448dd283";

      hash = "sha256-uoXMi6pMs5VrzUmjsLlQYFLob1A8NAt9CbFi8qhQXVQ=";

    })

    # cmake 4 compatibility

    (fetchpatch {

      name = "metis-cmake-minimum-required-bump.patch";

      url = "https://github.com/KarypisLab/METIS/commit/350931887dfc00c2e3cb7551c5abf30e0297126a.patch";

      hash = "sha256-vX1GSZOLDxO9IIAQmNa9ADreEWSHCU9eF9L8qiSHye8=";

    })

  ];

  nativeBuildInputs = [

    unzip

    cmake



  nativeBuildInputs = [ cmake ];



  buildInputs = [ gklib ] ++ lib.optional stdenv.cc.isClang llvmPackages.openmp;



  preConfigure = ''

    make config

  '';



  cmakeFlags = [

    (lib.cmakeBool "OPENMP" true)

    (lib.cmakeBool "SHARED" (!stdenv.hostPlatform.isStatic))

  ];



  meta = {

    description = "Serial graph partitioning and fill-reducing matrix ordering";

    homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview";

    homepage = "https://github.com/KarypisLab/METIS";

    license = lib.licenses.asl20;

    maintainers = with lib.maintainers; [ qbisi ];

    platforms = lib.platforms.all;

  };

}
 
})

pkgs/by-name/pa/parmetis/package.nix

+11 −7
Original line number Diff line number Diff line
@@ -3,31 +3,35 @@ 
  stdenv,

  fetchFromGitHub,

  cmake,

  gklib,

  metis,

  mpi,

}:



stdenv.mkDerivation {

  pname = "parmetis";

  version = "4.0.3";

  version = "4.0.3-unstable-2023-03-26";



  src = fetchFromGitHub {

    owner = "KarypisLab";

    repo = "ParMETIS";

    rev = "d90a2a6cf08d1d35422e060daa28718376213659";

    hash = "sha256-22YQxwC0phdMLX660wokRgmAif/9tRbUmQWwNMZ//7M=";

    rev = "8ee6a372ca703836f593e3c450ca903f04be14df";

    hash = "sha256-L9SLyr7XuBUniMH3JtaBrUHIGzVTF5pr014xovQf2cI=";

  };



  nativeBuildInputs = [ cmake ];

  enableParallelBuilding = true;

  buildInputs = [ mpi ];

  buildInputs = [

    gklib

    metis

    mpi

  ];



  configurePhase = ''

    runHook preConfigure



    tar xf ${metis.src}

    mv metis-* metis

    make config metis_path=metis gklib_path=metis/GKlib prefix=$out

    make config metis_path=${metis} gklib_path=${gklib} prefix=$out \

       shared=${if stdenv.hostPlatform.isStatic then "0" else "1"}



    runHook postConfigure

  '';

pkgs/by-name/so/sofa/package.nix

+6 −0
Original line number Diff line number Diff line
@@ -40,6 +40,12 @@ stdenv.mkDerivation (finalAttrs: { 
      url = "https://github.com/sofa-framework/sofa/commit/700b6cdd94fe24a51b2a7014fb0fc83e6abe1fbc.patch";

      hash = "sha256-czc1u03USQt18d7cMPmXYguBhSb5JOJLplPvoixp+3w=";

    })

    (fetchpatch {

      # Compat with metis > 5.1

      name = "sofamatrix-allow-newer-metis-versions.patch";

      url = "https://github.com/sofa-framework/sofa/commit/f1a45da7c77776ea9559b1958576b0187a8b9958.patch";

      hash = "sha256-YPMBKG1Ju5XON14CmSYNqljpqEbFRvI5SgKwOnxs7+I=";

    })

  ];



  propagatedNativeBuildInputs = [