bowtie2: refactor

{ lib, stdenv, fetchFromGitHub, cmake, tbb, zlib, python3, perl }:

{ lib

, stdenv

, fetchFromGitHub

, cmake

, perl

, python3

, tbb

, zlib

}:

stdenv.mkDerivation rec {

stdenv.mkDerivation (finalAttrs: {

  pname = "bowtie2";

  version = "2.5.2";

  src = fetchFromGitHub {

    owner = "BenLangmead";

    repo = pname;

    rev = "v${version}";

    repo = "bowtie2";

    rev = "refs/tags/v${finalAttrs.version}";

    sha256 = "sha256-Bem4SHY/74suZPDbw/rwKMLBn3bRq5ooHbBoVnKuYk0=";

  };

  meta = with lib; {

    description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";

    license = licenses.gpl3;

    license = licenses.gpl3Plus;

    homepage = "http://bowtie-bio.sf.net/bowtie2";

    changelog = "https://github.com/BenLangmead/bowtie2/releases/tag/${finalAttrs.src.rev}";

    maintainers = with maintainers; [ rybern ];

    platforms = platforms.all;

    broken = stdenv.isAarch64; # only x86 is supported

    mainProgram = "bowtie2";

  };

}

})