Unverified Commit 8fc84df0 authored by Sefa Eyeoglu's avatar Sefa Eyeoglu Committed by GitHub
Browse files

bustools: init at 0.44.0 (#347603)

parents 322eb94b 62922959
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+44 −0
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{
  lib,
  stdenv,
  fetchFromGitHub,
  cmake,
  zlib,
  testers,
  bustools,
}:

stdenv.mkDerivation rec {
  pname = "bustools";
  version = "0.44.0";

  src = fetchFromGitHub {
    owner = "BUStools";
    repo = "bustools";
    rev = "v${version}";
    sha256 = "sha256-chdHwwnhHFGJLu4KZmFJp3SZ26GFnbelm3Qz0yeKoBs=";
  };

  nativeBuildInputs = [ cmake ];

  buildInputs = [ zlib ];

  passthru.tests.version = testers.testVersion {
    package = bustools;
    command = "bustools version";
  };

  meta = {
    description = "bustools is a program for manipulating BUS files for single cell RNA-Seq datasets";
    longDescription = ''
      bustools is a program for manipulating BUS files for single cell RNA-Seq datasets. It can be used to error correct barcodes, collapse UMIs, produce gene count or transcript compatibility count matrices, and is useful for many other tasks. It is also part of the kallisto | bustools workflow for pre-processing single-cell RNA-seq data.
    '';
    homepage = "https://www.kallistobus.tools/";
    downloadPage = "https://bustools.github.io/download";
    changelog = "https://github.com/BUStools/bustools/releases/tag/v${version}";
    maintainers = [ lib.maintainers.dflores ];
    license = lib.licenses.bsd2;
    mainProgram = "bustools";
    platforms = lib.platforms.unix;
  };
}