connectome-workbench: 2.0.1 -> 2.1.0 (#457957)

  cmake,

  libGL,

  libGLU,

  libsForQt5,

  qt6,

}:

stdenv.mkDerivation (finalAttrs: {

  pname = "connectome-workbench";

  version = "2.0.1";

  version = "2.1.0";

  src = fetchFromGitHub {

    owner = "Washington-University";

    repo = "workbench";

    tag = "v${finalAttrs.version}";

    hash = "sha256-M5iverVDhBI/ijbgwfa6gHrthY4wrUi+/2A/443jBqg=";

    hash = "sha256-f1T0i4x7rr3u/3ZvJ4cEAb377e7YcaGMKa2uUslVqR0=";

  };

  sourceRoot = "${finalAttrs.src.name}/src";

  patches = [

    # remove after next release:

    (fetchpatch {

      name = "fix-missing-includes-in-CZIlib";

      url = "https://github.com/Washington-University/workbench/commit/7ba3345d161d567a4b628ceb02ab4471fc96cb20.diff";

      hash = "sha256-DMrJOr/2Wr4o4Z3AuhWfMZTX8f/kOYWwZQzBUwIrTd8=";

      relative = "src";

    })

  ];

  postPatch = ''

    substituteInPlace kloewe/{cpuinfo,dot}/CMakeLists.txt --replace-fail "cmake_minimum_required(VERSION 3.0)" "cmake_minimum_required(VERSION 3.10)"

  ''

  +

    # tests are minimal and test_driver fails to link (also -DBUILD_TESTING=... is ignored):

    # ld: ../Brain/libBrain.a(BrainOpenGLVolumeObliqueSliceDrawing.cxx.o): undefined reference to symbol 'glGetFloatv'

    # ld: /nix/store/a5vcvrkh1c2ng5kr584g3zw3991vnhks-libGL-1.7.0/lib/libGL.so.1: error adding symbols: DSO missing from command line

    ''

      substituteInPlace CMakeLists.txt  \

        --replace-fail "ADD_SUBDIRECTORY ( Tests )" ""  \

        --replace-fail "ENABLE_TESTING()" ""

    '';

  # tests are minimal and test_driver fails to link (also -DBUILD_TESTING=... is ignored):

  # ld: ../Brain/libBrain.a(BrainOpenGLVolumeObliqueSliceDrawing.cxx.o): undefined reference to symbol 'glGetFloatv'

  # ld: /nix/store/a5vcvrkh1c2ng5kr584g3zw3991vnhks-libGL-1.7.0/lib/libGL.so.1: error adding symbols: DSO missing from command line

  env.NIX_CFLAGS_COMPILE = "-fpermissive";

  nativeBuildInputs = [

    cmake

    libsForQt5.wrapQtAppsHook

    qt6.wrapQtAppsHook

  ];

  buildInputs = [

    libGL

    libGLU

  ]

  ++ (with libsForQt5; [

  ++ (with qt6; [

    qtbase

    qt5compat

  ]);

  # note: we should be able to unvendor a few libs (ftgl, quazip, qwt) but they aren't detected properly

  cmakeFlags = [

    "-DWORKBENCH_USE_QT6=TRUE"

    "-DWORKBENCH_USE_QT5=FALSE"

  ];

  meta = {

    description = "Visualization and discovery tool used to map neuroimaging data";

    homepage = "https://www.humanconnectome.org/software/connectome-workbench";