Unverified Commit 6b045549 authored by Aleksana's avatar Aleksana Committed by GitHub
Browse files

igv: only replace actual java commands with the full path (#338340)

parents de383830 5d19a9ed

pkgs/applications/science/biology/igv/default.nix

+2 −2
Original line number Diff line number Diff line
@@ -13,10 +13,10 @@ stdenv.mkDerivation rec { 
    cp -Rv * $out/share/



    sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh

    sed -i 's#java#${jdk17}/bin/java#g' $out/share/igv.sh

    sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igv.sh



    sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igvtools

    sed -i 's#java#${jdk17}/bin/java#g' $out/share/igvtools

    sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igvtools



    ln -s $out/share/igv.sh $out/bin/igv

    ln -s $out/share/igvtools $out/bin/igvtools