Commit 612942fb authored by Martin Weinelt's avatar Martin Weinelt
Browse files

python3Packages.h5py: 3.11.0 -> 3.12.1 

https://github.com/h5py/h5py/blob/3.12.1/docs/whatsnew/3.12.rst
parent 85690131

pkgs/development/python-modules/h5py/default.nix

+13 −21
Original line number Diff line number Diff line 
{

  lib,

  fetchPypi,

  fetchpatch,

  buildPythonPackage,

  pythonOlder,

  setuptools,

  numpy,

  hdf5,

  cython_0,

  cython,

  pkgconfig,

  mpi4py ? null,

  openssh,
@@ -23,7 +22,7 @@ let 
  mpiSupport = hdf5.mpiSupport;

in

buildPythonPackage rec {

  version = "3.11.0";

  version = "3.12.1";

  pname = "h5py";

  pyproject = true;
@@ -31,30 +30,22 @@ buildPythonPackage rec { 


  src = fetchPypi {

    inherit pname version;

    hash = "sha256-e36PeAcqLt7IfJg28l80ID/UkqRHVwmhi0F6M8+yH6k=";

    hash = "sha256-Mm1wtT0xuqYfALiqX5XC/LliGj7oNl13DFUaE9u8v98=";

  };



  patches = [

    # Unlock an overly strict locking of mpi4py version (seems not to be necessary).

    # See also: https://github.com/h5py/h5py/pull/2418/files#r1589372479

    ./mpi4py-requirement.patch

    # Fix 16-bit float dtype and tests on darwin (remove in next release)

    (fetchpatch {

      url = "https://github.com/h5py/h5py/commit/a27a1f49ce92d985e14b8a24fa80d30e5174add2.patch";

      hash = "sha256-7TcmNSJucknq+Vnv4ViT6S0nWeH1+krarWxq6WXLYEA=";

    })

  ];

  pythonRelaxDeps = [ "mpi4py" ];



  # avoid strict pinning of numpy, can't be replaced with pythonRelaxDepsHook,

  # see: https://github.com/NixOS/nixpkgs/issues/327941

  postPatch = ''

    substituteInPlace pyproject.toml \

      --replace-fail "numpy >=2.0.0rc1" "numpy"

      --replace-fail "numpy >=2.0.0, <3" "numpy"

  '';

  pythonRelaxDeps = [ "mpi4py" ];



  env = {

    HDF5_DIR = "${hdf5}";

    HDF5_MPI = if mpiSupport then "ON" else "OFF";

  };



  postConfigure = ''

    # Needed to run the tests reliably. See:
@@ -64,15 +55,16 @@ buildPythonPackage rec { 


  preBuild = lib.optionalString mpiSupport "export CC=${lib.getDev mpi}/bin/mpicc";



  nativeBuildInputs = [

    cython_0

  build-system = [

    cython

    numpy

    pkgconfig

    setuptools

  ];



  buildInputs = [ hdf5 ] ++ lib.optional mpiSupport mpi;



  propagatedBuildInputs =

  dependencies =

    [ numpy ]

    ++ lib.optionals mpiSupport [

      mpi4py