biodbhts : init at 3.01

  BioExtAlign = callPackage ../development/perl-modules/Bio-Ext-Align { };

  BioDBHTS = buildPerlModule {

    pname = "Bio-DB-HTS";

    version = "3.01";

    src = fetchurl {

      url = "mirror://cpan/authors/id/A/AV/AVULLO/Bio-DB-HTS-3.01.tar.gz";

      sha256 = "12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42";

    };

    buildInputs = [ pkgs.htslib pkgs.zlib ];

    propagatedBuildInputs = [ BioPerl ];

    htslibStore = toString pkgs.htslib;

    postPatch = ''

      # -Wl,-rpath not recognized : replaced by -rpath=

      sed -i 's/Wl,-rpath,/rpath=/' Build.PL

    '';

    preBuild = ''

      export HTSLIB_DIR=${pkgs.htslib}

    '';

    meta = {

      description = "Perl interface to HTS library for DNA sequencing";

      license = lib.licenses.asl20;

    };

  };

  BioPerl = buildPerlPackage {

    pname = "BioPerl";

    version = "1.7.8";